G8286


Basic Information

Item Value
gene id G8286
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 49844582 ~ 49858455 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU10233
CTGACATGCTGTTAACAAACAATGGCTAATGTGCTAAGGTGAAAAGCGCAAATGTGTGTGGGAGTTACCTTGTTTCAGTGTAACATATATAAGTAGTTGCCGCATTAGTTGCTGCACTAAAGGCTGTAGACAGAAGCTGCTGACAAGATGGCTCTGACTGTGATACTGCTCCTCTCGTCTCTGCTGTTGCTCCCGGGGCTCCTCGCCAACAACTCGGAAATAGGCAAGGAGTTTCCGGTCAAGCTGATAGTGCAGGACACCATCCACCTCACCCCTGATCAGATACTCCAAACCACCATCCCATATAGAGCTATCCTGCTGGGGGCAATGAGGAAAATCAGTGAGGCTGACCCTGAAAACTTCAGGTGTCGGGTGTTACATCCCGGAGCCCAATGAAACCATCATCCTGAGGTTCACCACCTGGGATTAGAAATAACTGCAACATCAATATCTATCCACCAGAGGGCACACTTTCCCAACCtcctcaaaattaaaattactcAAGTGGCCATAAGCATTTGTAACAGGTGTGTCACTTGTGGGTCTTCCTGGCTGCTTTGTGGCACCGATTGATTCTTTCAGCTTCCAATTTTGTTAAAGTGTGATGCCCAGATGCACAAGATTGATCAGGCTGTAGTCGGTTAGGTGTGATGCCTTGAAAGATCTTTTCTTGCTGTATAGTCTACATGACACTGTGATTATGATTTCCTGCTAAATTGGCTAATTTCTTGTCAATCAGTTTCCATTGTGATTTCAGTACAAGGCTGAGCAGAGCTTCATACAACAGTTTTCCTAAGGAATTGGACATTTCCCTTTGTGACTGTATAAAAGAATCACATAAAAATACTCAACAGGCATACATTAATATGAGCTGAATGTCCATCAGACCAAGATACCAATACTAAGAAATTCACCAACACAGTTCAGTGATCTGCAAATCAAAAACACCTAGAACCAAATTCATTGAGcttcataaataatatatggCAGAGACTGACCTGGACTCTCTGGGGAGACTCTTGTCAATGGCATCTGGTATTCAGGCTGGTGTCAGAAGGAAGAGCTAAAGGCACTTGTTCACACCGCCAGGACAGACAGCACTCAAATTCAGTCTGTCGACCATAGCACTCAGTGTATCTCTCTGGTTAAAACAAACTCTTATTTTGTAACTGCCTTGAATGTCTCTGCTACTGTtctaaagtgaaataaaatgatactGAAGACAATATTGTATGTTGATGTCACTCTCTTTATTTGAATACAATTCTGGGAAAGTTGAAGGCTAGCATTCCTCTCTGT

Function

GO: NA

KEGG:

id description
ko04972 Pancreatic secretion
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU10233 True 1299 lncRNA 0.43 3 49844582 49858455

Neighbor

gene id symbol gene type direction distance location
AMCG00004447 NA coding downstream 3062 49839535 ~ 49841520 (-)
AMCG00004445 NA coding downstream 10842 49831199 ~ 49833740 (-)
AMCG00004446 NA coding downstream 21672 49820555 ~ 49822910 (-)
AMCG00004444 NA coding downstream 48398 49775924 ~ 49796184 (-)
AMCG00004440 NA coding downstream 72304 49768277 ~ 49772278 (-)
AMCG00004456 c1qtnf5 coding upstream 183804 50042259 ~ 50048074 (-)
AMCG00004460 cbl coding upstream 286255 50144710 ~ 50157745 (-)
AMCG00004461 cbl,LOC102793573 coding upstream 311621 50170076 ~ 50182056 (-)
AMCG00004465 NA coding upstream 330237 50188692 ~ 50197647 (-)
AMCG00004466 NA coding upstream 372819 50231274 ~ 50234343 (-)
G8281 NA non-coding downstream 30528 49811378 ~ 49814054 (-)
G8133 NA non-coding downstream 742670 49101708 ~ 49101912 (-)
G8118 NA non-coding downstream 796509 48977624 ~ 49048073 (-)
G8116 NA non-coding downstream 888119 48955376 ~ 48956463 (-)
G7979 NA non-coding downstream 2158015 47685925 ~ 47686567 (-)
G8307 NA non-coding upstream 85843 49944298 ~ 49945808 (-)
G8308 NA non-coding upstream 89428 49947883 ~ 49948531 (-)
G8309 NA non-coding upstream 92395 49950850 ~ 49951534 (-)
G8335 NA non-coding upstream 126050 49984505 ~ 49988218 (-)
G8338 NA non-coding upstream 130817 49989272 ~ 49989482 (-)
AMCG00004429 NA other downstream 419400 49411207 ~ 49425182 (-)
AMCG00004420 NA other downstream 859271 48940024 ~ 48985311 (-)
AMCG00004412 zbtb16,zbtb16a,LOC107703518 other downstream 1363867 48463181 ~ 48480715 (-)
AMCG00004403 cadm1a,LOC107548188,LOC107715321 other downstream 2537993 47048124 ~ 47306589 (-)
AMCG00004398 anc13,anapc13,LOC107756075,LOC107693524 other downstream 2956828 46883292 ~ 46887754 (-)
G8310 NA other upstream 90406 49948861 ~ 49949592 (-)
G8340 NA other upstream 146677 50005132 ~ 50008694 (-)
AMCG00004457 rnf26 other upstream 207943 50066398 ~ 50071941 (-)
AMCG00004467 trappc4,LOC106612982,LOC107561742 other upstream 351528 50209983 ~ 50225826 (-)
G8501 NA other upstream 812611 50671066 ~ 50673375 (-)

Expression


Co-expression Network