AMCG00004461 (cbl,LOC102793573)


Basic Information

Item Value
gene id AMCG00004461
gene name cbl,LOC102793573
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 50170076 ~ 50182056 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004461
CTGGCCCGGGTTGTCAACGTCTCTCAGTCTTACGAGCGATCGGGATTTAATGGGACCTTTGCTTCGCTAggacccccctccccttcccttcccttccccccGACCGACCCCCTCACTCGATCCCGCTCGGGCGCTGTCCACTacggcgggggggggggtgtctttGCCCGGGCGAGGAGCAGCGAGGGCGGGTCACCCAGCCCCGGCGTCTGCAGCAGCGGCAGCACTCCCAGCATGGCCGGCAATCTGAAGAAAGGTGGGGGCTTGATCGGGATGATGAAGGACGCTTTCCAGCCCCACCATCACCACCTCCATGCGCATCACCAGCCGGGGGCGGTGGACAAGAAGACGGTGGAGAAATGCTGGAAACTGATGGACAAGGTGGTGCGGCTGTGCCAGAACCCCAAGCTGGCTCTGAAGAACAGCCCCCCCTACATCCTGGACCTTCTCCCAGACACCTACCAGCACCTGCGCACAATCCTGTCGCGCTACGAGGGCAAGATGGAGACGCTGGGTGAGAACGAGTATTTCCGCGTCTTCATGGAGAATCTCACCAAGAAGACCAAGCAGACCATCAGCCTCTTCAAGGAGGGCAAGGAGAGGATGTACGAGGAGAACTCGCAGCCCAGggaggaggaggctgaGAACCTACGCTCAGCTGAGaatgcactgaaacacaactgCAAAGTCTTGGAGATGTTTCTCCAGGACGATTTCAAATTTGGACATGGCTGCCATGCCGAGAGCGAAGTTCACACCGCCAGCATGACTCGCATTTCCGTTGAGGACACGCTATCATGCTCTGGGGACACGGGGGCTGTACTGCATGCAAACCCACAATGCAAATGA

Function

symbol description
cbl Predicted to enable SH3 domain binding activity; receptor tyrosine kinase binding activity; and ubiquitin protein ligase activity. Acts upstream of or within definitive hemopoiesis. Predicted to be located in cytoplasm. Predicted to be active in membrane raft and plasma membrane. Used to study myeloproliferative neoplasm. Human ortholog(s) of this gene implicated in acute myeloid leukemia; juvenile myelomonocytic leukemia; lung non-small cell carcinoma; and myeloid neoplasm. Orthologous to human CBL (Cbl proto-oncogene).

NR:

description
PREDICTED: E3 ubiquitin-protein ligase CBL isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004461 True 849 mRNA 0.59 3 50170076 50182056

Neighbor

gene id symbol gene type direction distance location
AMCG00004460 cbl coding downstream 12331 50144710 ~ 50157745 (-)
AMCG00004456 c1qtnf5 coding downstream 122002 50042259 ~ 50048074 (-)
AMCG00004447 NA coding downstream 328556 49839535 ~ 49841520 (-)
AMCG00004445 NA coding downstream 336336 49831199 ~ 49833740 (-)
AMCG00004446 NA coding downstream 347166 49820555 ~ 49822910 (-)
AMCG00004465 NA coding upstream 6636 50188692 ~ 50197647 (-)
AMCG00004466 NA coding upstream 49218 50231274 ~ 50234343 (-)
AMCG00004470 NA coding upstream 99689 50281745 ~ 50285988 (-)
AMCG00004471 NA coding upstream 107886 50289942 ~ 50290739 (-)
AMCG00004475 NA coding upstream 458130 50640186 ~ 50660336 (-)
G8370 NA non-coding downstream 34345 50127772 ~ 50135731 (-)
G8350 NA non-coding downstream 131721 50033396 ~ 50038355 (-)
G8347 NA non-coding downstream 150052 50019824 ~ 50020024 (-)
G8346 NA non-coding downstream 154291 50015539 ~ 50015785 (-)
G8345 NA non-coding downstream 155324 50014390 ~ 50014752 (-)
G8500 NA non-coding upstream 486890 50668946 ~ 50674553 (-)
G8505 NA non-coding upstream 499574 50681630 ~ 50681962 (-)
G8524 NA non-coding upstream 512518 50694574 ~ 50694803 (-)
G8541 NA non-coding upstream 539123 50721179 ~ 50722312 (-)
G8550 NA non-coding upstream 566962 50749018 ~ 50752724 (-)
AMCG00004457 rnf26 other downstream 98135 50066398 ~ 50071941 (-)
G8340 NA other downstream 161382 50005132 ~ 50008694 (-)
G8310 NA other downstream 220484 49948861 ~ 49949592 (-)
AMCG00004429 NA other downstream 744894 49411207 ~ 49425182 (-)
AMCG00004420 NA other downstream 1184765 48940024 ~ 48985311 (-)
AMCG00004467 trappc4,LOC106612982,LOC107561742 other upstream 27927 50209983 ~ 50225826 (-)
G8501 NA other upstream 489010 50671066 ~ 50673375 (-)
AMCG00004480 LOC107565095,LOC104942062,LOC107576893 other upstream 528783 50710839 ~ 50720925 (-)
G8542 foxred1 other upstream 541811 50723867 ~ 50725353 (-)
AMCG00004481 NA other upstream 548907 50730963 ~ 50738516 (-)

Expression


Co-expression Network