G8372 (cbl,LOC107601723)


Basic Information

Item Value
gene id G8372
gene name cbl,LOC107601723
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 50143305 ~ 50144990 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU10335
ttttttatttagttttttgttattaCTTCCCTACCAATATCACTGACAGTgcctgagagaggaggaaatTAGTAAATCTGGTAACCCTGGGCGCAGAGCCACACAAACTAGGTGAATTTGTACGTCGTCTATACCGTATTCATAAACACGATTCCACTCGACAAGACGGCCACGGCGATCCACAAACACAAGCTTAAGACACCATTTCTAGTCCTAcaacctgttttgtttgtttgtgtgttttgttttgtctgctgTATTTACTAATTAGGTTGCATTTTGCAGCTTTAAATTGTACTCATGAATTCAGATCCATTTCGGCCCAGACGTCCCTTGTAAAATGACATCCTGATCCTACTTCAATGTCTCCTGTCTGTCCGTGCCagccaaacaaatacatgtgatATACAGGGGAGGTCAAGGCATCTTTACAAACGCACAGCGCGTCTCCTGCTGAAAACCCAGCCTTGGTGCCTTCAAAATGAGCACACAGATGACTGCACTTGTCCTTCAGACTGACAGCTCTGCAATTCCCCCAAGGCTCTGTCTGCGCTTCAAGCTCATACGCCATGCTactttgagagagaaaaaaaaaaactaaaaatctataaaaataaaaataaaaaaaggagtACCGAAGCAATGCAATAAAAGGCCATTTCAACAGCTGAAACTGCAAACATCCACCTTGGGTTCCTACATACAGGCTCATCCTGTGAAGCCTCACTACAGCACAACCCCGAAACATCCAGTCCAGAAATAGCTGGTCTTGAGTCGAGGGGAGGAGGACACTTAACTAGTTGGGTAAAATGATAAAGACATCATTGCTCTTCCCCCGACTCCTAAACGCCCCTGGAGCCGCCACAGATGCCTGGCTGAACGATTGACGATGGCGAGCGTCACGGCATTCCTGGAAAACGGCACAGTCAACCCAAGCATCTGTCCCTCTGGTGAAACGGTGGGCTGAACCCAGCCTCGGGTTTGGCCTTACTCCAGGACACAGACCCGAACCCTTTAAGTGGTTTTAGTCCAtcttaaattgtaatgtttcaaCACCGCAGCACTGCTGCAGCGCTTCCCGTTTCATCAGATGGTGTCGGACAGGTCCACGGCTGTCGGGTCGAGGAAGGGTTTGTTGGGCAGGGGGGAGAACTGACCTTTtgtcttttggtttgttttgtgacgttttttccgaAGCAATGAACATGTGAGGCAACGGAGTCTCGTGAGCTCACAGGAGGAGGGGCCTCTGTCCGCGTTCAGCCAATGAGCTGGAGAAAGAGCAGAGTATGCCTCTCCACGATGGCCAATCAGCACCAAGATGCAGTGTCAGGCAGCTGGGTGGGGTCGACATGGGGGCTGGGCTTGTAGCACGTGGGCGGGGCTATGTTAGGATGTGTGCCGTAGAAGGAATGGAAACAAACTCTCTCAGGATATTCTTGGCCATTTCAATATTGTTCTGTGCAATCAGCAGGGCTTTCTGTATGTCCTGATAGGAGTAGCCTTGGCTCATGAGATGCTCGATCTCACTGTTGATTTGGAGGCTCATGCTCCCCCCGCCGCCCCCTCCACCGGGCGGCACAGGGCTCGGCCTCCTCTCTGAATTGATCCGCCTGGGCAGTGGCTTAGGAGGCCTTTCTGGTGCTTGACTTAAGTCAGCAAAAG

Function

symbol description
cbl Predicted to enable SH3 domain binding activity; receptor tyrosine kinase binding activity; and ubiquitin protein ligase activity. Acts upstream of or within definitive hemopoiesis. Predicted to be located in cytoplasm. Predicted to be active in membrane raft and plasma membrane. Used to study myeloproliferative neoplasm. Human ortholog(s) of this gene implicated in acute myeloid leukemia; juvenile myelomonocytic leukemia; lung non-small cell carcinoma; and myeloid neoplasm. Orthologous to human CBL (Cbl proto-oncogene).

NR:

description
E3 ubiquitin-protein ligase CBL isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU10335 True 1665 lncRNA 0.49 2 50143305 50144990

Neighbor

gene id symbol gene type direction distance location
AMCG00004458 NA coding upstream 7471 50121429 ~ 50135834 (+)
AMCG00004455 LOC107601691 coding upstream 110963 50004310 ~ 50032342 (+)
AMCG00004453 kmt2a coding upstream 153641 49989275 ~ 49989664 (+)
AMCG00004448 LOC108233819,LOC107098727 coding upstream 155814 49984727 ~ 49987491 (+)
AMCG00004450 ube4a coding upstream 160147 49968474 ~ 49983158 (+)
AMCG00004459 NA coding downstream 39712 50184702 ~ 50187493 (+)
AMCG00004462 slc37a4,LOC106612980,LOC107670393,LOC107593481 coding downstream 54515 50199505 ~ 50212190 (+)
AMCG00004464 rps25,LOC107758587,LOC107583381,LOC107679519,LOC107565279 coding downstream 67227 50212217 ~ 50214554 (+)
AMCG00004468 NA coding downstream 113841 50258831 ~ 50265447 (+)
AMCG00004469 tbrg1 coding downstream 127552 50272542 ~ 50281575 (+)
G8371 NA non-coding upstream 3600 50137629 ~ 50139705 (+)
G8356 NA non-coding upstream 75224 50066435 ~ 50068081 (+)
G8188 NA non-coding upstream 557210 49582118 ~ 49586095 (+)
G8167 NA non-coding upstream 707554 49434043 ~ 49435751 (+)
G8140 NA non-coding upstream 895271 49246488 ~ 49248034 (+)
G8373 NA non-coding downstream 381 50145371 ~ 50145823 (+)
G8374 NA non-coding downstream 2886 50147876 ~ 50148195 (+)
G8375 cbl non-coding downstream 3894 50148884 ~ 50149121 (+)
G8376 NA non-coding downstream 4335 50149325 ~ 50149542 (+)
G8380 cbl,LOC102793573 non-coding downstream 26530 50171520 ~ 50171951 (+)
AMCG00004449 NA other upstream 191772 49938552 ~ 49951533 (+)
AMCG00004442 NA other upstream 329281 49806361 ~ 49814024 (+)
AMCG00004425 zbtb44,LOC106580932,LOC106612543,LOC102781915 other upstream 824470 49298736 ~ 49318835 (+)
AMCG00004424 NA other upstream 1083250 49043590 ~ 49060055 (+)
G8099 NA other upstream 1209210 48932450 ~ 48934095 (+)
G8377 NA other downstream 6274 50151264 ~ 50157719 (+)
AMCG00004463 NA other downstream 91687 50236677 ~ 50243043 (+)
AMCG00004477 NA other downstream 596398 50741388 ~ 50753432 (+)
G8606 NA other downstream 969951 51114941 ~ 51115262 (+)
AMCG00004501 NA other downstream 1794559 51939549 ~ 51946818 (+)

Expression


Co-expression Network