Gene
RNA
| Item | Value |
|---|---|
| gene id | G8376 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 50149325 ~ 50149542 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU10339 | True | 218 | lncRNA | 0.55 | 1 | 50149325 | 50149542 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00004458 | NA | coding | upstream | 13491 | 50121429 ~ 50135834 (+) |
| AMCG00004455 | LOC107601691 | coding | upstream | 116983 | 50004310 ~ 50032342 (+) |
| AMCG00004453 | kmt2a | coding | upstream | 159661 | 49989275 ~ 49989664 (+) |
| AMCG00004448 | LOC108233819,LOC107098727 | coding | upstream | 161834 | 49984727 ~ 49987491 (+) |
| AMCG00004450 | ube4a | coding | upstream | 166167 | 49968474 ~ 49983158 (+) |
| AMCG00004459 | NA | coding | downstream | 35160 | 50184702 ~ 50187493 (+) |
| AMCG00004462 | slc37a4,LOC106612980,LOC107670393,LOC107593481 | coding | downstream | 49963 | 50199505 ~ 50212190 (+) |
| AMCG00004464 | rps25,LOC107758587,LOC107583381,LOC107679519,LOC107565279 | coding | downstream | 62675 | 50212217 ~ 50214554 (+) |
| AMCG00004468 | NA | coding | downstream | 109289 | 50258831 ~ 50265447 (+) |
| AMCG00004469 | tbrg1 | coding | downstream | 123000 | 50272542 ~ 50281575 (+) |
| G8375 | cbl | non-coding | upstream | 204 | 50148884 ~ 50149121 (+) |
| G8374 | NA | non-coding | upstream | 1130 | 50147876 ~ 50148195 (+) |
| G8373 | NA | non-coding | upstream | 3502 | 50145371 ~ 50145823 (+) |
| G8372 | cbl,LOC107601723 | non-coding | upstream | 4335 | 50143305 ~ 50144990 (+) |
| G8371 | NA | non-coding | upstream | 9620 | 50137629 ~ 50139705 (+) |
| G8380 | cbl,LOC102793573 | non-coding | downstream | 21978 | 50171520 ~ 50171951 (+) |
| G8443 | NA | non-coding | downstream | 134883 | 50284425 ~ 50288071 (+) |
| G8509 | NA | non-coding | downstream | 545682 | 50695224 ~ 50695567 (+) |
| G8538 | NA | non-coding | downstream | 609533 | 50759075 ~ 50759360 (+) |
| G8596 | NA | non-coding | downstream | 821414 | 50970956 ~ 50971302 (+) |
| AMCG00004449 | NA | other | upstream | 197792 | 49938552 ~ 49951533 (+) |
| AMCG00004442 | NA | other | upstream | 335301 | 49806361 ~ 49814024 (+) |
| AMCG00004425 | zbtb44,LOC106580932,LOC106612543,LOC102781915 | other | upstream | 830490 | 49298736 ~ 49318835 (+) |
| AMCG00004424 | NA | other | upstream | 1089270 | 49043590 ~ 49060055 (+) |
| G8099 | NA | other | upstream | 1215230 | 48932450 ~ 48934095 (+) |
| G8377 | NA | other | downstream | 1722 | 50151264 ~ 50157719 (+) |
| AMCG00004463 | NA | other | downstream | 87135 | 50236677 ~ 50243043 (+) |
| AMCG00004477 | NA | other | downstream | 591846 | 50741388 ~ 50753432 (+) |
| G8606 | NA | other | downstream | 965399 | 51114941 ~ 51115262 (+) |
| AMCG00004501 | NA | other | downstream | 1790007 | 51939549 ~ 51946818 (+) |
