G8605


Basic Information

Item Value
gene id G8605
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 51114580 ~ 51114852 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU10625
atctgagcgactttgacaagggccacattgtgatggctagacgactgggtcagagcatctccaaaactgcagctcttgtggggtgttcccggtctgcagtggtcagtacctatcaaaagtggtccaaggaaggaaaagcggtgaactggcgacagggtcgtgggcggccaaggctcattgatgcacgtggggagcgaaggctggcccgtgtggtccgatccaacagacgagctactgtagctcaaattgctgaaaaagtgaatgctggttctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU10625 True 273 lncRNA 0.55 1 51114580 51114852

Neighbor

gene id symbol gene type direction distance location
AMCG00004486 ets1,LOC106612966 coding upstream 166054 50938013 ~ 50948526 (+)
AMCG00004485 NA coding upstream 264385 50849074 ~ 50850195 (+)
AMCG00004482 LOC106612963 coding upstream 322025 50788031 ~ 50792555 (+)
AMCG00004478 NA coding upstream 381780 50722025 ~ 50732800 (+)
AMCG00004479 fam118b coding upstream 405451 50698554 ~ 50709129 (+)
AMCG00004489 LOC108434141,LOC103024239 coding downstream 205005 51319857 ~ 51326045 (+)
AMCG00004488 LOC106612967,LOC106581099 coding downstream 246888 51361740 ~ 51390889 (+)
AMCG00004490 rexo2 coding downstream 394603 51509455 ~ 51513615 (+)
AMCG00004494 NA coding downstream 578251 51693103 ~ 51723186 (+)
AMCG00004496 NA coding downstream 678011 51792863 ~ 51800719 (+)
G8596 NA non-coding upstream 143278 50970956 ~ 50971302 (+)
G8538 NA non-coding upstream 355220 50759075 ~ 50759360 (+)
G8509 NA non-coding upstream 419013 50695224 ~ 50695567 (+)
G8443 NA non-coding upstream 826509 50284425 ~ 50288071 (+)
G8380 cbl,LOC102793573 non-coding upstream 942629 50171520 ~ 50171951 (+)
G8658 NA non-coding downstream 530997 51645849 ~ 51663424 (+)
G8764 NA non-coding downstream 976033 52090885 ~ 52091291 (+)
G8775 NA non-coding downstream 1053464 52168316 ~ 52168540 (+)
G8808 NA non-coding downstream 1153748 52268600 ~ 52268807 (+)
G8811 NA non-coding downstream 1254241 52369093 ~ 52369476 (+)
AMCG00004477 NA other upstream 361148 50741388 ~ 50753432 (+)
AMCG00004463 NA other upstream 871537 50236677 ~ 50243043 (+)
G8377 NA other upstream 956861 50151264 ~ 50157719 (+)
AMCG00004449 NA other upstream 1163047 49938552 ~ 49951533 (+)
AMCG00004442 NA other upstream 1300556 49806361 ~ 49814024 (+)
G8606 NA other downstream 89 51114941 ~ 51115262 (+)
AMCG00004501 NA other downstream 824697 51939549 ~ 51946818 (+)
AMCG00004509 NA other downstream 874501 51989353 ~ 52013630 (+)
G9012 NA other downstream 2068542 53183394 ~ 53183983 (+)
AMCG00004546 dixdc1,LOC107715327,LOC107693513 other downstream 2144327 53259179 ~ 53270254 (+)

Expression


Co-expression Network