G9243


Basic Information

Item Value
gene id G9243
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 54204221 ~ 54204990 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU11444
CGCCCAGGGTCTGAACCAGGTCCCAGTCCTGCACAAAGGGCACCGCCATTGCCACAGACGAGGAcaacaTACCTGGGACTCGCTGCGACCCCAGCGACGAGCTCAAGACCCGCACAGGCCGGCCTCGGCGCCTCCCCTCCCGGGCAGAGAGAGCCTGCGCCCCGGGCTGCTTCACAGCGCCTGGAAATGCGTGTCtgattatttattcagttgAACTCGGTTAGTCCTTGGCGGTTATGCTATCCTCTCCTATCCGGCTCTATCTGTGCAGAGATGCTGCTCTGAACTTCGCGGTACGTCACCCGTTTAAAAAGACGCAAAGTTTCGAAGTGTTTAAAAAGTTCGCCACccccgtcccgtcccgtcccgtcccgtcccgtcccgcCGTGTCCCGGCCCGCTGCCGTCCGCGGTGCCGGTCGTGTGTGGTGTCGGTCCGGACAATGACAGCGGCTGCGCAGCTGCTCTCCCGCGGCTGTTTGGCGCGCTGCTGCATCCAAACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU11444 True 502 lncRNA 0.63 2 54204221 54204990

Neighbor

gene id symbol gene type direction distance location
AMCG00004578 NA coding upstream 103473 54077164 ~ 54100748 (+)
AMCG00004577 NA coding upstream 180065 54016361 ~ 54024156 (+)
AMCG00004576 NA coding upstream 191879 54011849 ~ 54012342 (+)
AMCG00004568 NA coding upstream 341004 53849628 ~ 53863217 (+)
AMCG00004566 NA coding upstream 356167 53826947 ~ 53848054 (+)
AMCG00004580 aplp2,LOC102785027 coding downstream 52578 54257568 ~ 54281403 (+)
AMCG00004586 NA coding downstream 89944 54294934 ~ 54302577 (+)
AMCG00004584 NA coding downstream 103258 54308248 ~ 54311938 (+)
AMCG00004587 NA coding downstream 172259 54377249 ~ 54381369 (+)
AMCG00004597 NA coding downstream 180601 54385591 ~ 54394043 (+)
G9191 NA non-coding upstream 191192 54012826 ~ 54013029 (+)
G9170 NA non-coding upstream 222238 53933169 ~ 53981983 (+)
G9160 NA non-coding upstream 337774 53864940 ~ 53866447 (+)
G9043 NA non-coding upstream 904349 53299663 ~ 53299872 (+)
G9000 NA non-coding upstream 1058427 53145595 ~ 53145794 (+)
G9244 NA non-coding downstream 1028 54206018 ~ 54206971 (+)
G9245 NA non-coding downstream 2161 54207151 ~ 54207360 (+)
G9246 NA non-coding downstream 2631 54207621 ~ 54207935 (+)
G9247 NA non-coding downstream 4726 54209716 ~ 54209918 (+)
G9248 NA non-coding downstream 5351 54210341 ~ 54210706 (+)
G9197 NA other upstream 170914 54032031 ~ 54033307 (+)
G9129 NA other upstream 342693 53677564 ~ 53861528 (+)
G9128 NA other upstream 360362 53648011 ~ 53843859 (+)
G9132 NA other upstream 437111 53766543 ~ 53767110 (+)
AMCG00004563 NA other upstream 533699 53636039 ~ 53670522 (+)
AMCG00004585 nfrkb,LOC107567165,LOC107715331,LOC107693532 other downstream 109132 54314122 ~ 54327599 (+)
AMCG00004588 NA other downstream 141512 54346502 ~ 54354976 (+)
G9300 sidt2 other downstream 189801 54394791 ~ 54395300 (+)
AMCG00004595 NA other downstream 265028 54470018 ~ 54482791 (+)
AMCG00004604 NA other downstream 395628 54600618 ~ 54629219 (+)

Expression


Co-expression Network