G2836


Basic Information

Item Value
gene id G2836
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 16599058 ~ 16599329 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU3458
attggaaaagctgagtgcagaaaaagaaaatgcagacagCTGGCAGTGGACAGCACGcttgagggtctttgagaggaaggggagtagggagacagggcggtagttctgaggagaggtggcgtcaagggtaggtttcttgagcagaacagaagagatccaaggctgaagaggggagggacggacaggacaagacgagagaggacagagagaaaaaaaagggagCTGATGAGgaaggagaacaaagaggaggtagcgcAGCACGGTACGAcggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3458 True 272 lncRNA 0.43 1 16599058 16599329

Neighbor

gene id symbol gene type direction distance location
AMCG00003733 kif28p coding upstream 9559 16576388 ~ 16589499 (+)
AMCG00003729 NA coding upstream 29355 16547072 ~ 16569703 (+)
AMCG00003730 snap25,snap25a,LOC107698362,LOC107719097,LOC102796069,LOC103398514,LOC107599071 coding upstream 76472 16518106 ~ 16522586 (+)
AMCG00003727 NA coding upstream 171350 16415450 ~ 16427708 (+)
AMCG00003719 NA coding upstream 310356 16287662 ~ 16288702 (+)
AMCG00003737 NA coding downstream 52505 16651834 ~ 16660947 (+)
AMCG00003738 NA coding downstream 94241 16693570 ~ 16699348 (+)
AMCG00003739 NA coding downstream 248465 16847794 ~ 16850839 (+)
AMCG00003743 NA coding downstream 273314 16872643 ~ 16877245 (+)
AMCG00003745 hnrnpu,LOC107689318,LOC107729300,LOC107693167 coding downstream 416335 17015664 ~ 17029628 (+)
G2833 NA non-coding upstream 1689 16593264 ~ 16597369 (+)
G2797 NA non-coding upstream 168503 16429034 ~ 16430555 (+)
G2755 NA non-coding upstream 367560 16229935 ~ 16231498 (+)
G2721 NA non-coding upstream 513066 16085140 ~ 16085992 (+)
G2719 NA non-coding upstream 514192 16081182 ~ 16084866 (+)
G2861 NA non-coding downstream 268970 16868299 ~ 16934020 (+)
G2945 LOC104942205,LOC105908308,LOC105908357,LOC107592771,LOC107752785 non-coding downstream 608706 17208035 ~ 17210041 (+)
G2967 NA non-coding downstream 654937 17254266 ~ 17256450 (+)
G3265 NA non-coding downstream 1839477 18438806 ~ 18439666 (+)
G3269 NA non-coding downstream 1945655 18544984 ~ 18545538 (+)
AMCG00003712 extl3,LOC106571659,LOC106608199 other upstream 559418 16024871 ~ 16039640 (+)
AMCG00003702 NA other upstream 1280830 15301080 ~ 15318228 (+)
AMCG00003690 NA other upstream 1732300 14851752 ~ 14866758 (+)
G2440 NA other upstream 2179326 14418516 ~ 14419732 (+)
AMCG00003655 xdh other upstream 3392219 13155060 ~ 13206839 (+)
AMCG00003744 NA other downstream 433241 17032570 ~ 17042594 (+)
G3047 NA other downstream 1082488 17681817 ~ 17683988 (+)
AMCG00003779 ctsb,catb,LOC107381178 other downstream 1532590 18131919 ~ 18142633 (+)
G3108 NA other downstream 1547331 18146660 ~ 18152314 (+)
AMCG00003828 ctgf,ctgfa,moxd1,LOC106571301,LOC107683930,LOC106571350 other downstream 2672636 19271965 ~ 19397686 (+)

Expression


Co-expression Network