G3666


Basic Information

Item Value
gene id G3666
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 20912142 ~ 20912988 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU4439
cttatttaaataactttcaaatgatgaaacaataaataacagtagCAATTCAGGGTTTGCCAGAACGCAGCTGAGAGATCCAACAAAAAGAGTAACTAATTCTACACagttaaaagaacaaaaaatagatATACCTGGATTTGTCTCTAGCTTTCTATTtctatatacaattatacagaaATCCAAATATCCATGACTATGTAACACCTATATATCAAAAAGACACTTACATCCATTAGGGCAGCATTTATGTAGTTACTGCTCTCTCCATCAATTGTAATAAGAAAAGGCAGGCATCTGTCAGGAGGGAGCATATCCATGAAGCGATTCTTTTCATGATTCCTAGGCAGGAGAGCAATGCTACAGTCTTCAGGTTGGGGTTGAGGGGTCACAGAATTCAgtgtctgcaaTCATCTTTAAGGTGAGAGGAGTTGCTTTGAGAGTCTATTCTGATCATGTCATAGTAAGTAGCTTTAAATTCACAGGCTGGAATGGCCGTCTCCCCACACAAGCATGCTTCCAGAATTGCATCGTGGATAAAAATGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4439 True 546 lncRNA 0.38 2 20912142 20912988

Neighbor

gene id symbol gene type direction distance location
AMCG00003836 NA coding upstream 578606 20333123 ~ 20333536 (+)
AMCG00003835 NA coding upstream 778787 20132773 ~ 20133355 (+)
AMCG00003833 NA coding upstream 967125 19944010 ~ 19945017 (+)
AMCG00003832 NA coding upstream 968305 19933174 ~ 19943837 (+)
AMCG00003827 NA coding upstream 1280695 19630470 ~ 19631447 (+)
AMCG00003844 lama2,LOC107653134 coding downstream 375472 21288460 ~ 21296218 (+)
AMCG00003843 lama2 coding downstream 401086 21314074 ~ 21333224 (+)
AMCG00003845 NA coding downstream 435239 21348227 ~ 21438679 (+)
AMCG00003846 NA coding downstream 527126 21440114 ~ 21447121 (+)
AMCG00003847 NA coding downstream 578896 21491884 ~ 21535758 (+)
G3661 NA non-coding upstream 3625 20903572 ~ 20908517 (+)
G3648 NA non-coding upstream 51848 20835737 ~ 20860294 (+)
G3635 NA non-coding upstream 110996 20777059 ~ 20801146 (+)
G3620 NA non-coding upstream 323578 20588091 ~ 20588564 (+)
G3582 NA non-coding upstream 492212 20391190 ~ 20419930 (+)
G3670 NA non-coding downstream 12824 20925812 ~ 20927802 (+)
G3690 NA non-coding downstream 176607 21089595 ~ 21090254 (+)
G3754 NA non-coding downstream 682868 21595856 ~ 21598430 (+)
G3757 NA non-coding downstream 687644 21600632 ~ 21600860 (+)
G3767 NA non-coding downstream 819503 21732491 ~ 21732699 (+)
AMCG00003828 ctgf,ctgfa,moxd1,LOC106571301,LOC107683930,LOC106571350 other upstream 1514456 19271965 ~ 19397686 (+)
G3108 NA other upstream 2759828 18146660 ~ 18152314 (+)
AMCG00003779 ctsb,catb,LOC107381178 other upstream 2769509 18131919 ~ 18142633 (+)
G3047 NA other upstream 3228154 17681817 ~ 17683988 (+)
AMCG00003744 NA other upstream 3869548 17032570 ~ 17042594 (+)
G3751 NA other downstream 636213 21549201 ~ 21549533 (+)
G3771 NA other downstream 832862 21745850 ~ 21760630 (+)
AMCG00003853 NA other downstream 977535 21890523 ~ 21901865 (+)
G3799 med23 other downstream 1009648 21922636 ~ 21923787 (+)
AMCG00003874 NA other downstream 1770028 22683016 ~ 22769227 (+)

Expression


Co-expression Network