G3670


Basic Information

Item Value
gene id G3670
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 20925812 ~ 20927802 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU4443
TAAATTTTGTGAATTATAGGAAACTTGCCAAGAAGAGAAAGGATGCCATTGGAAATACACGTCAGGAGATGACTCATATGGTCAATGCCATGGATAGGAGTTATGCTGACCAGAGCACACTTCATGCAGAGGATCCCTTGTCTGTTACCTTCATGGACTCCCACAACTTCAGCAATAGGTTGCCCAATGATCCACTTGTGCCGACTGCTGTGTTAGGTGAGGACCCAGTCCTGTGTCATCACCCCCTGCatggcttgtttgtttgcatgtattGAGGTTCTTTCCATACAATTTCATTGTCTCTGTGATGGAGAGAAGTGGGTGGGAGGTTCTGTTCTGCATAATGGtgaatatagatatattttccatttgagtGAGACGTTTAgttaactgtattaaaaaaagaaaaacaggaattgTTCCCAAATGTTCCATATTAGTCTGCTTCTGATTTCTATTGCCACAACAATGAGAAATCCCATTTAACTGGAACTCTGCCAGTGGCAGCACTGTTAAGACATGGCACAGCACATAGACTACTAGAGGTTTTCTTCCTATTGAGTTGAAATCTTTTTACAGCCTCTGGCTGTGAATGAACATTAAATAGCcctaatgaaaaacattgactTTTTACACTAAAGACAAGGTTTGCCTTGGTTTATATAAAATTCCTCCAggaaatattttgtgaaatattcaataaggggaaaaaaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4443 True 715 lncRNA 0.51 2 20925812 20927802

Neighbor

gene id symbol gene type direction distance location
AMCG00003836 NA coding upstream 592276 20333123 ~ 20333536 (+)
AMCG00003835 NA coding upstream 792457 20132773 ~ 20133355 (+)
AMCG00003833 NA coding upstream 980795 19944010 ~ 19945017 (+)
AMCG00003832 NA coding upstream 981975 19933174 ~ 19943837 (+)
AMCG00003827 NA coding upstream 1294365 19630470 ~ 19631447 (+)
AMCG00003844 lama2,LOC107653134 coding downstream 360658 21288460 ~ 21296218 (+)
AMCG00003843 lama2 coding downstream 386272 21314074 ~ 21333224 (+)
AMCG00003845 NA coding downstream 420425 21348227 ~ 21438679 (+)
AMCG00003846 NA coding downstream 512312 21440114 ~ 21447121 (+)
AMCG00003847 NA coding downstream 564082 21491884 ~ 21535758 (+)
G3666 NA non-coding upstream 12824 20912142 ~ 20912988 (+)
G3661 NA non-coding upstream 17295 20903572 ~ 20908517 (+)
G3648 NA non-coding upstream 65518 20835737 ~ 20860294 (+)
G3635 NA non-coding upstream 124666 20777059 ~ 20801146 (+)
G3620 NA non-coding upstream 337248 20588091 ~ 20588564 (+)
G3690 NA non-coding downstream 161793 21089595 ~ 21090254 (+)
G3754 NA non-coding downstream 668054 21595856 ~ 21598430 (+)
G3757 NA non-coding downstream 672830 21600632 ~ 21600860 (+)
G3767 NA non-coding downstream 804689 21732491 ~ 21732699 (+)
G3770 NA non-coding downstream 822725 21750527 ~ 21759799 (+)
AMCG00003828 ctgf,ctgfa,moxd1,LOC106571301,LOC107683930,LOC106571350 other upstream 1528126 19271965 ~ 19397686 (+)
G3108 NA other upstream 2773498 18146660 ~ 18152314 (+)
AMCG00003779 ctsb,catb,LOC107381178 other upstream 2783179 18131919 ~ 18142633 (+)
G3047 NA other upstream 3241824 17681817 ~ 17683988 (+)
AMCG00003744 NA other upstream 3883218 17032570 ~ 17042594 (+)
G3751 NA other downstream 621399 21549201 ~ 21549533 (+)
G3771 NA other downstream 818048 21745850 ~ 21760630 (+)
AMCG00003853 NA other downstream 962721 21890523 ~ 21901865 (+)
G3799 med23 other downstream 994834 21922636 ~ 21923787 (+)
AMCG00003874 NA other downstream 1755214 22683016 ~ 22769227 (+)

Expression


Co-expression Network