G454


Basic Information

Item Value
gene id G454
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 3006968 ~ 3058201 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU549
atatacactcacctaaaggattattaggaacactgtgtttgacccccttttgccttcagaactgccttaattctacgtggcattgattcaacaaggtgctgaaagcattctttagaaatgttggcccatattgataggatagcatcttgcagttgatggagatttgtgggatgcacatccagggcacgaagctcccgttccaccacatcccaaagatgctctattgggttgagatctggtgactgtgggggccattttagtacagtgaactcattgtcatgttcaagaaaccaatttgaaatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU549 True 303 lncRNA 0.41 2 3006968 3058201

Neighbor

gene id symbol gene type direction distance location
AMCG00003428 ehd3,LOC108429356,LOC107727655 coding upstream 152420 2842040 ~ 2854548 (+)
AMCG00003427 ehd3,LOC108429356,LOC105017749,LOC106571429,LOC107675095,LOC107727655,LOC107716590 coding upstream 183645 2816879 ~ 2823323 (+)
AMCG00003430 NA coding upstream 372356 2633409 ~ 2634612 (+)
AMCG00003429 NA coding upstream 373617 2626401 ~ 2633351 (+)
AMCG00003425 vash2,LOC107553414,LOC102789397 coding upstream 510925 2469840 ~ 2496043 (+)
AMCG00003432 NA coding downstream 100857 3159058 ~ 3159814 (+)
AMCG00003433 NA coding downstream 120052 3178253 ~ 3184829 (+)
AMCG00003434 NA coding downstream 130894 3189095 ~ 3203082 (+)
AMCG00003438 LOC107602173 coding downstream 298682 3356883 ~ 3396478 (+)
AMCG00003442 ccdc25 coding downstream 357013 3415214 ~ 3428290 (+)
G445 NA non-coding upstream 47537 2957218 ~ 2959431 (+)
G443 NA non-coding upstream 97526 2907642 ~ 2909442 (+)
G431 NA non-coding upstream 195416 2811314 ~ 2811552 (+)
G426 NA non-coding upstream 198347 2808418 ~ 2808621 (+)
G408 NA non-coding upstream 362100 2615996 ~ 2644868 (+)
G515 NA non-coding downstream 281645 3339846 ~ 3366343 (+)
G642 NA non-coding downstream 917552 3975753 ~ 3976039 (+)
G646 NA non-coding downstream 1028695 4086896 ~ 4090319 (+)
G684 NA non-coding downstream 1238358 4296559 ~ 4374939 (+)
G690 NA non-coding downstream 1268452 4326653 ~ 4379819 (+)
AMCG00003473 NA other downstream 1394363 4452564 ~ 4455142 (+)
AMCG00003469 NA other downstream 1455830 4514031 ~ 4522400 (+)
AMCG00003480 NA other downstream 2245249 5303450 ~ 5334752 (+)
G1012 NA other downstream 3429491 6487692 ~ 6494905 (+)
AMCG00003524 rps7,LOC107668222 other downstream 4439839 7498040 ~ 7504015 (+)

Expression


Co-expression Network