G6598


Basic Information

Item Value
gene id G6598
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 38616244 ~ 38616464 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU8085
ccgtggtccagttctgatgctcacgtgcccattgtaggcactttcggcagtggacaggggtcagcatgggcaccctgactggtctgcggctacgcagccccatacgcaacaaactgcgatgcactgtgtgttctgacacctttctatcagaaccagcattcactttttcagcaatttgagctacagtagctcgtctgttggatcggaccacacgggccagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU8085 True 221 lncRNA 0.19 1 38616244 38616464

Neighbor

gene id symbol gene type direction distance location
AMCG00004214 NA coding upstream 389433 38225556 ~ 38226811 (+)
AMCG00004216 NA coding upstream 396149 38213382 ~ 38220095 (+)
AMCG00004215 LOC106593169,LOC107726627,LOC107690899 coding upstream 430107 38088863 ~ 38186137 (+)
AMCG00004208 NA coding upstream 1009022 37570803 ~ 37607222 (+)
AMCG00004209 SF3B6,sf3b6,pm14 coding upstream 1045978 37567333 ~ 37570266 (+)
AMCG00004218 NA coding downstream 115044 38731508 ~ 38743566 (+)
AMCG00004222 NA coding downstream 209357 38825821 ~ 38833968 (+)
AMCG00004223 mcm8,LOC107738559 coding downstream 223552 38840016 ~ 38850011 (+)
AMCG00004224 crls1,LOC107663140,LOC107737905,LOC107678734,LOC103476593 coding downstream 234325 38850789 ~ 38855317 (+)
AMCG00004225 NA coding downstream 337673 38954137 ~ 38963635 (+)
G6586 NA non-coding upstream 149601 38466396 ~ 38466643 (+)
G6585 NA non-coding upstream 197468 38416598 ~ 38418776 (+)
G6573 NA non-coding upstream 360761 38255229 ~ 38255483 (+)
G6471 NA non-coding upstream 1099746 37514882 ~ 37516498 (+)
G6428 NA non-coding upstream 1271799 37344061 ~ 37344445 (+)
G6617 NA non-coding downstream 133450 38749914 ~ 38756252 (+)
G6627 NA non-coding downstream 159489 38775953 ~ 38777500 (+)
G6653 NA non-coding downstream 241654 38858118 ~ 38859005 (+)
G6667 NA non-coding downstream 310274 38926738 ~ 38927030 (+)
G6676 NA non-coding downstream 350214 38966678 ~ 38966890 (+)
AMCG00004210 fam49a,znf395,LOC108440968,LOC106571599,LOC107696187,LOC107553485,LOC106608122 other upstream 768524 37832623 ~ 37847720 (+)
G6369 NA other upstream 1616086 36999357 ~ 37000158 (+)
G6328 NA other upstream 1724498 36861547 ~ 36891746 (+)
G6314 NA other upstream 1841721 36774001 ~ 36774523 (+)
AMCG00004179 ptrhd1,LOC103399259 other upstream 1918359 36687630 ~ 36697885 (+)
AMCG00004257 dusp10,LOC106607590 other downstream 1709946 40326410 ~ 40341235 (+)
G7094 NA other downstream 2843112 41459576 ~ 41507231 (+)
AMCG00004304 NA other downstream 3593966 42210430 ~ 42216362 (+)
G7329 fabp7,LOC108247051,LOC104945778 other downstream 4072315 42688779 ~ 42691109 (+)
AMCG00004355 hyou1,LOC100380749 other downstream 6001721 44618185 ~ 44640732 (+)

Expression


Co-expression Network