G8103


Basic Information

Item Value
gene id G8103
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 48955967 ~ 48959831 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU9967
agtaATTATCTCACCGGTAACTGCGGTTCATCAAGGTCACTATCATCTGAAATTtgaagttttttgtttggtttaggtACTCTCTTCATTTTAGGAGAGGGCATTTTTGTTAGGTCATTAAGTTTTCTTCTTAGTTTGCCTtcttttcctaaaataaaaataaaataaataaaaccctgcaTTATGTCCACAGATATTTggggattatatttatttgtcataaAAATACTGTGCTTTGACCATACAAATTAAGATGGACAGCCAACACTGAATCAAAACTGAAGTTAAATTATATCTGGTTTTATTGTAAAGCACAACACACAATAAATCGTTCTTACAAATGCCAGTCAAGTATGACGAGTTTTTAGCGCCCTCAGCACCACCTACCATGTTATAAGAGTATGTTAGAAGtacaacacattaataaagtaaacattaatttcaaatatactGTGATTGTATATATCAAATAGCATGtaaagactttaaaaaaataaaaataaataaacattgttacCAGTCATAATGATCTGCGCTTCATGGACAGGCTATCCACCTTTTGGAGGTTTGTTCGTGTCTCTCCACTCTGCTCTGAAGTTTCGAGTAGTCTCTTCGTCATCATCAGCAATGCTGAATAAATCAAAATTGTGAATCCAAGCAGTGGGAATCACGCTGTAAGAGTCTTTGTCGACCCCGCTTTCCCACTTCACCAACGCGTGCATCACTGCCATACTACCTTCACCTTCTcgtctgtttttttctgcacGTTTTTCCCCCTGACAGGTCACGGCACAAAAAACAGTCCCGCTCTGCATTCTGaaaaagaACGGAGGGAAACATGGACTACCCAACAAGAAGCAACAAAGTTACTAAAATATCAGATTCTCAGAGTGTCGTTGCTGTCAATGCAGCCAGTGATGTGGAGCCATCAGATACAGAAGCTGATGAAAGAACATGTAAGTTTCCTAAATTAATATGGTGCATCAAAATACTTTAGCACTTTCAACTGTTTCTTTGTGATTCCTAAAATTACTTT
>TU9968
GAGGGTGGTGGGTGAAGTGAGTCTGTATAACACTTTGGGATCTTTCCAGCTGCTACATGtaaggtattattatttattaatacattaactcTAGTCtctgaaactaaaacaaaggcCAAAGGAACATTTCAAATGCTAACCCTTTGTGTTCTATACAGTTAAAAAGAAGAGTTAGAAATTTTGTACAACAGCATTTACATACCATATATGGCTTCCACCTTTAAGCGATCCAGAGGTGTCTTTTTCTCCGAAGTTGGATCTCTCTTGCTGCCACCACCACGAAGATTGCTCTTTAGTAATGTTGGAATGTCAAAGACAGCAACCGTCAGGGTTCTTACATATGATGTATTCGTGCTGCACCTCTCTGCAAGGATCCAGGACAGTTTGTCAATGTAAACTCCAGTGCCTGGGAATATTTCCACCTAAAAGACAatgaaaaagaACGGAGGGAAACATGGACTACCCAACAAGAAGCAACAAAGTTACTAAAATATCAGATTCTCAGAGTGTCGTTGCTGTCAATGCAGCCAGTGATGTGGAGCCATCAGATACAGAAGCTGATGAAAGAACATGTAAGTTTCCTAAATTAATATGGTGCATCAAAATACTTTAGCACTTTCAACTGTTTCTTTGTGATTCCTAAAATTACTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU9967 True 1036 lncRNA 0.54 3 48957600 48959831
TU9968 False 652 lncRNA 0.39 3 48955967 48959831

Neighbor

gene id symbol gene type direction distance location
AMCG00004415 NA coding upstream 109364 48830538 ~ 48846603 (+)
AMCG00004416 LOC105903796 coding upstream 312537 48629172 ~ 48643430 (+)
AMCG00004414 NA coding upstream 331815 48613149 ~ 48624152 (+)
AMCG00004404 LOC104954612 coding upstream 503270 48445728 ~ 48452697 (+)
AMCG00004407 NA coding upstream 512700 48428416 ~ 48443267 (+)
AMCG00004422 NA coding downstream 49860 49009691 ~ 49040036 (+)
AMCG00004426 LOC106580931 coding downstream 319329 49279160 ~ 49293068 (+)
AMCG00004428 NA coding downstream 443377 49403208 ~ 49411567 (+)
AMCG00004427 NA coding downstream 465934 49425765 ~ 49429808 (+)
AMCG00004431 NA coding downstream 559293 49519124 ~ 49522913 (+)
G8083 NA non-coding upstream 107841 48847526 ~ 48848126 (+)
G8044 zbtb16 non-coding upstream 487156 48463181 ~ 48468811 (+)
G7977 NA non-coding upstream 1270086 47685520 ~ 47685881 (+)
G7974 NA non-coding upstream 1307393 47648188 ~ 47648574 (+)
G7949 NA non-coding upstream 1958162 46992217 ~ 46997805 (+)
G8111 NA non-coding downstream 64325 49024156 ~ 49029183 (+)
G8140 NA non-coding downstream 286657 49246488 ~ 49248034 (+)
G8167 NA non-coding downstream 474212 49434043 ~ 49435751 (+)
G8188 NA non-coding downstream 622287 49582118 ~ 49586095 (+)
G8356 NA non-coding downstream 1106604 50066435 ~ 50068081 (+)
G8099 NA other upstream 21872 48932450 ~ 48934095 (+)
G7999 NA other upstream 808811 48146888 ~ 48147156 (+)
AMCG00004380 NA other upstream 2987661 45962010 ~ 45968306 (+)
AMCG00004355 hyou1,LOC100380749 other upstream 4315235 44618185 ~ 44640732 (+)
G7329 fabp7,LOC108247051,LOC104945778 other upstream 6264858 42688779 ~ 42691109 (+)
AMCG00004424 NA other downstream 83759 49043590 ~ 49060055 (+)
AMCG00004425 zbtb44,LOC106580932,LOC106612543,LOC102781915 other downstream 338905 49298736 ~ 49318835 (+)
AMCG00004442 NA other downstream 846530 49806361 ~ 49814024 (+)
AMCG00004449 NA other downstream 978721 49938552 ~ 49951533 (+)
G8377 NA other downstream 1191433 50151264 ~ 50157719 (+)

Expression


Co-expression Network