Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00004428 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 49403208 ~ 49411567 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0005922 | connexin complex | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00004428 | True | 846 | mRNA | 0.57 | 4 | 49403208 | 49411567 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00004426 | LOC106580931 | coding | upstream | 110140 | 49279160 ~ 49293068 (+) |
| AMCG00004422 | NA | coding | upstream | 363172 | 49009691 ~ 49040036 (+) |
| AMCG00004415 | NA | coding | upstream | 556605 | 48830538 ~ 48846603 (+) |
| AMCG00004416 | LOC105903796 | coding | upstream | 759778 | 48629172 ~ 48643430 (+) |
| AMCG00004414 | NA | coding | upstream | 779056 | 48613149 ~ 48624152 (+) |
| AMCG00004427 | NA | coding | downstream | 14198 | 49425765 ~ 49429808 (+) |
| AMCG00004431 | NA | coding | downstream | 107557 | 49519124 ~ 49522913 (+) |
| AMCG00004430 | LOC107598122 | coding | downstream | 135702 | 49547269 ~ 49571300 (+) |
| AMCG00004434 | NA | coding | downstream | 197312 | 49608879 ~ 49631014 (+) |
| AMCG00004437 | NA | coding | downstream | 345554 | 49757121 ~ 49772253 (+) |
| G8140 | NA | non-coding | upstream | 155174 | 49246488 ~ 49248034 (+) |
| G8111 | NA | non-coding | upstream | 374025 | 49024156 ~ 49029183 (+) |
| G8103 | NA | non-coding | upstream | 443377 | 48955967 ~ 48959831 (+) |
| G8083 | NA | non-coding | upstream | 555082 | 48847526 ~ 48848126 (+) |
| G8044 | zbtb16 | non-coding | upstream | 934397 | 48463181 ~ 48468811 (+) |
| G8167 | NA | non-coding | downstream | 22476 | 49434043 ~ 49435751 (+) |
| G8188 | NA | non-coding | downstream | 170551 | 49582118 ~ 49586095 (+) |
| G8356 | NA | non-coding | downstream | 654868 | 50066435 ~ 50068081 (+) |
| G8371 | NA | non-coding | downstream | 726062 | 50137629 ~ 50139705 (+) |
| G8372 | cbl,LOC107601723 | non-coding | downstream | 731738 | 50143305 ~ 50144990 (+) |
| AMCG00004425 | zbtb44,LOC106580932,LOC106612543,LOC102781915 | other | upstream | 84373 | 49298736 ~ 49318835 (+) |
| AMCG00004424 | NA | other | upstream | 343153 | 49043590 ~ 49060055 (+) |
| AMCG00004421 | NA | other | upstream | 376853 | 48897117 ~ 49026355 (+) |
| G8099 | NA | other | upstream | 469113 | 48932450 ~ 48934095 (+) |
| G7999 | NA | other | upstream | 1256052 | 48146888 ~ 48147156 (+) |
| AMCG00004442 | NA | other | downstream | 394794 | 49806361 ~ 49814024 (+) |
| AMCG00004449 | NA | other | downstream | 526985 | 49938552 ~ 49951533 (+) |
| G8377 | NA | other | downstream | 739697 | 50151264 ~ 50157719 (+) |
| AMCG00004463 | NA | other | downstream | 825110 | 50236677 ~ 50243043 (+) |
| AMCG00004477 | NA | other | downstream | 1329821 | 50741388 ~ 50753432 (+) |
