AMCG00005357


Basic Information

Item Value
gene id AMCG00005357
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 22060209 ~ 22061467 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005357
ATGGTGGTGCAGACAGGACCCCCGCCCCAGGGGTGCGCACGGTGCCCCTTCCACGTGCGGACGGGGGAGAACGCCTGGGTGCTGTACCCAGAGTTCTGCGGGGCGTTCGGGTTCCCGGGGGGCCCCACCCTGCCCAACCAGCAGCTGCTGTTCTACGAGCTGCGGACCCCCCAGGGGGCACTACTGCAGAGGCTGGGGGGCGGCTCTGTCAGCGCCATGACGCGCTTCCTGGAGGAGTGGCCGGGCGCGCGCCTGGACCTGCACTTCTCCCAGCTCTACCACACGCAGGATGGGCACCCACACGGCCCCGCCAACCGCCTGGCGCTGCGGGCGCTGGCCTCCCTGTGGCCGCGCGTCACGCTGAGCCCCCTGTGTGCGGGCGGCTGGCTCTCGCTGCTGAGGGGCTTCGTGCGCGGCGTCCCAGCCGAGGTATGGCAGCGCCCCCTCCTGCCAGGGAGGGTGGCAGCCGACCGGCACAATGCATATCAGATCGCCGCCATCACCGGGGTGGCGCCGGCCTTCCTGGACCTCTCCCTGGAGGCTCCCGCCATGCCTCTGTCTCGCCCTCCTCACAGACCtgctcctcctccgcctcctcctctgcctcttcttcctcctgctctCATCCCCACCCCCTACCCCTCCCTGTACCCGTACCCCAACCCCCCCAAGACCCGCTCACGCAACGTGGTGCGGCACGTCCACATGCCGCTGCCCTCCCCTGGGACTGGGTCATCTCTCCGCCTTCCCCCGGGCCAGGCTGTGGAGATGGTggtggtgagagagagggaggaggaagaggataaggaggaagaggagggaagTATGAGAGACAGGAGGCACAGGAAGGGGAGGTCCCACAGGAAGTGA

Function

GO: NA

KEGG:

id description
K18773 APOBEC4; C->U-editing enzyme APOBEC4

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005357 True 870 mRNA 0.69 2 22060209 22061467

Neighbor

gene id symbol gene type direction distance location
AMCG00005358 NA coding upstream 29111 22024523 ~ 22031098 (+)
AMCG00005356 plpp6,LOC107683852,LOC107739850,LOC107669136,LOC107712867,LOC107597802 coding upstream 35721 22020862 ~ 22024488 (+)
AMCG00005350 NA coding upstream 122882 21932366 ~ 21937327 (+)
AMCG00005348 NA coding upstream 131736 21920884 ~ 21928473 (+)
AMCG00005349 LOC107687326 coding upstream 140312 21917115 ~ 21919897 (+)
AMCG00005364 NA coding downstream 55022 22116489 ~ 22122971 (+)
AMCG00005366 NA coding downstream 62315 22123782 ~ 22130249 (+)
AMCG00005370 NA coding downstream 68818 22130285 ~ 22132482 (+)
AMCG00005381 NA coding downstream 114019 22175486 ~ 22178376 (+)
AMCG00005378 NA coding downstream 120197 22181664 ~ 22198741 (+)
G147027 NA non-coding upstream 103164 21956601 ~ 21957045 (+)
G147024 NA non-coding upstream 109622 21950328 ~ 21950587 (+)
G147022 NA non-coding upstream 111591 21948086 ~ 21948618 (+)
G146928 NA non-coding upstream 314758 21744879 ~ 21745451 (+)
G146915 NA non-coding upstream 347426 21710357 ~ 21712783 (+)
G147066 NA non-coding downstream 20177 22081644 ~ 22087344 (+)
G147029 NA other upstream 76065 21957440 ~ 21984144 (+)
AMCG00005351 NA other upstream 90517 21966858 ~ 21969692 (+)
G147025 NA other upstream 107327 21952569 ~ 21952882 (+)
G147021 NA other upstream 112218 21945558 ~ 21947991 (+)
AMCG00005345 NA other upstream 172641 21883199 ~ 21887568 (+)
AMCG00005365 sec22b,sec22bb,LOC102790162,LOC108439390,LOC107676649,LOC100705437,LOC107585928,LOC107548814 other downstream 71098 22132565 ~ 22145610 (+)

Expression


Co-expression Network