G142958


Basic Information

Item Value
gene id G142958
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 1289709 ~ 1289985 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU179830
tcaacaaggcattttcgcccacaggactgccgcatactggatgtttttcccttttcacaccattctttgtaaaccctagaaatggttgtgcgtgaaaatcccagtaacctttctttcccattcagacatccagtttggagttcaggagattgtcttgaccaggaccacacccctaaatgcattgaagcaactgccatgtgattggttggttagataattgcattaatgagaaattgaacaggtgttcctaataatcctttaggtgagtgtatttctt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU179830 True 277 lncRNA 0.42 1 1289709 1289985

Neighbor

gene id symbol gene type direction distance location
AMCG00004758 NA coding upstream 629920 650702 ~ 659789 (+)
AMCG00004757 LOC107707585,LOC107599011,LOC107657879 coding upstream 732428 539775 ~ 557281 (+)
AMCG00004759 NA coding upstream 781883 479846 ~ 507826 (+)
AMCG00004746 NA coding upstream 1151456 134381 ~ 138253 (+)
AMCG00004747 osbpl9 coding upstream 1180506 48855 ~ 109203 (+)
AMCG00004774 NA coding downstream 117014 1406999 ~ 1407247 (+)
AMCG00004776 NA coding downstream 139533 1429518 ~ 1431810 (+)
AMCG00004775 NA coding downstream 145278 1435263 ~ 1457250 (+)
AMCG00004782 elavl4,LOC106613894 coding downstream 1200469 2490454 ~ 2490690 (+)
AMCG00004783 elavl4,LOC107657884,LOC106613894 coding downstream 1258622 2548607 ~ 2558673 (+)
G142910 NA non-coding upstream 496766 789038 ~ 792943 (+)
G142881 rpe65,LOC107708597,LOC107657893 non-coding upstream 587951 667957 ~ 701758 (+)
G142847 NA non-coding upstream 719566 566383 ~ 570143 (+)
G142835 NA non-coding upstream 850488 435422 ~ 439221 (+)
G142776 NA non-coding upstream 1020501 179387 ~ 269208 (+)
G142973 NA non-coding downstream 121972 1411957 ~ 1412207 (+)
G143029 NA non-coding downstream 969744 2259729 ~ 2308874 (+)
G143074 NA non-coding downstream 1269332 2559317 ~ 2562389 (+)
G143107 NA non-coding downstream 1391319 2681304 ~ 2681548 (+)
G143109 LOC103376870 non-coding downstream 1430313 2720298 ~ 2761630 (+)
AMCG00004749 NA other upstream 1166744 116491 ~ 122965 (+)
G143075 elavl4,LOC106613894,LOC103028496 other downstream 1150556 2440541 ~ 2559080 (+)
AMCG00004788 NA other downstream 1833096 3123081 ~ 3160209 (+)
AMCG00004793 NA other downstream 2087830 3377815 ~ 3395158 (+)
G143366 NA other downstream 2659441 3949426 ~ 3949837 (+)
G143404 LOC107757485,LOC107715094,LOC107588062,LOC107653629,LOC106613586,LOC107592717,LOC107669813 other downstream 2819037 4109022 ~ 4109655 (+)

Expression


Co-expression Network