G147029


Basic Information

Item Value
gene id G147029
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 21957440 ~ 21984144 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU184992
CTGAGACGGTGCAGTGTCTGATCTCTGTGTCCCTGATGCAGCAATCAGTCAATCCATGtatttagtatagcgcccttcgcacactgcatacacactacacacacacactacatgcacattgcacacactacacacacactccagaAACACAACACATGCACTGCACACCATTAGGTAAGTATTTAATCTTTGTCTTCTTCACAAAGTATGATCCTTCCACAGACAGCCAGGTTACAGACTCTATATCACGTCACAGACAAGACTTTCATATGCAGTTCTGATGGTTAAAACTCTGTATAAACTGTATAGACTGTGGATGTTGTGATGGTGGTCAGGGGTGAGAGGTGCTTCCACTGGCAGTCAGCGCTGGTCACTGTGGAGCGAAACGCAGCCACAGGCTCTGCAGAAACGTGAGGGGCTGCTGTAGGCAGGCGGGGGGGTCCTGCAGGAAGGCGGGGGGGTGCTGGCGAGTGTAGAGCACAGCGGCACAGAGCAGCAGGCCGGCCACCGACACATGGAGCAGCAGGGGCAGGCCGGAGGGGCGTGGCAGGTCCGGGACCGGCCGCGTCCTCATTGGCTGGGCCACTCGCTCCCACTGTGTGAGGATGGCGTGGCGAGCGCCGGCCCACTTCCCCGGCCCGCGGAGCCGGTACTGGTACGGGGTGCAGGGGCCCAGCATCACACTCAGCCCCAGACGAGGGTCCCGCAGCAGCAGCGCCAGCACACTGGGGCGCACCCCAAACTGCTCCGCCAGCTCGTCCATGTAGGGCATGTAGTCCACCTGGAGGGCATGGTGCTCTGGAGTG

Function

NR:

description
PREDICTED: lys-63-specific deubiquitinase BRCC36

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU184992 True 806 TUCP 0.59 2 21957440 21984144

Neighbor

gene id symbol gene type direction distance location
AMCG00005350 NA coding upstream 20113 21932366 ~ 21937327 (+)
AMCG00005348 NA coding upstream 28967 21920884 ~ 21928473 (+)
AMCG00005349 LOC107687326 coding upstream 37543 21917115 ~ 21919897 (+)
AMCG00005344 NA coding upstream 78906 21873027 ~ 21878534 (+)
AMCG00005335 LOC106569412 coding upstream 199558 21756187 ~ 21757882 (+)
AMCG00005356 plpp6,LOC107683852,LOC107739850,LOC107669136,LOC107712867,LOC107597802 coding downstream 36718 22020862 ~ 22024488 (+)
AMCG00005358 NA coding downstream 40379 22024523 ~ 22031098 (+)
AMCG00005357 NA coding downstream 76065 22060209 ~ 22061467 (+)
AMCG00005364 NA coding downstream 132345 22116489 ~ 22122971 (+)
AMCG00005366 NA coding downstream 139638 22123782 ~ 22130249 (+)
G147027 NA non-coding upstream 395 21956601 ~ 21957045 (+)
G147024 NA non-coding upstream 6853 21950328 ~ 21950587 (+)
G147022 NA non-coding upstream 8822 21948086 ~ 21948618 (+)
G146928 NA non-coding upstream 211989 21744879 ~ 21745451 (+)
G146915 NA non-coding upstream 244657 21710357 ~ 21712783 (+)
G147066 NA non-coding downstream 97500 22081644 ~ 22087344 (+)
G147025 NA other upstream 4558 21952569 ~ 21952882 (+)
G147021 NA other upstream 9449 21945558 ~ 21947991 (+)
AMCG00005345 NA other upstream 69872 21883199 ~ 21887568 (+)
G146952 NA other upstream 109304 21811732 ~ 21848136 (+)
AMCG00005340 ralgps2,LOC106531732 other upstream 252922 21680708 ~ 21704518 (+)
AMCG00005365 sec22b,sec22bb,LOC102790162,LOC108439390,LOC107676649,LOC100705437,LOC107585928,LOC107548814 other downstream 148421 22132565 ~ 22145610 (+)

Expression


Co-expression Network