AMCG00005702 (phkg1,LOC107677094,LOC107747678)


Basic Information

Item Value
gene id AMCG00005702
gene name phkg1,LOC107677094,LOC107747678
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 7989356 ~ 7999100 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005702
GGGCAGTATGCGGGCGGGGTGCGCTTGCGTGTCTGGTTGCGGCTGCAGCGGGGGTTATTTTTGGCTCTTGTCAATCGAGGCTCGTCCCTCTCGGTGCACAAAGGGCAAATCATTCCTCCCCGACAGGAGCCCAGATCGCACAGTTTCAGGACTGTTTGTGTATGGTGTCAGATACTTACTGGTGCGGGCTGGGATGCAGGACTGAGCCGGAGAGCGGGACTGGTTTTAAGGACATGCTGCCCGTTCGAATCCCATAACCCCGGGAACTACGTAACACAGGATGACGAAGGAGGAGGAGATCCCAGACTGGGTGGGGGCGAAGGAGTTCTATGACAAATATGACCCCAAGGAGATCCTGGGAAGGGGTGTGAGCAGCGTTGTGCGCCGCTGTATACACAAGCTCAGCAGCCAGGACTACGCGGTGAAGATCATAGACATCGCATCAGAGAAGATGTCCCCCCACGAGGTCCAGGAGATCCGGGAGTCCACGGCCAAAGAGATCGAGATCCTGAAGATGGTCTACGGCCAAGATAACATCATCCAGCTGAAAGATTGTTTTGAGTCCAAGGCCTTCTTTTTCCTGGTGTTTGACTTAATGAAGAAAGGAGAACTCTTTGATTACCTCACTGAAAAAGTAACTTTAAGCGAGAAGGAAACCAGGAAGATCATGCGTGCCTTGCTGGAAGTGGTCCAGTTCCTGCATTCCAAGAACATCGTCCACCGGGACCTGAAGCCCGAGAACATCCTCCTGGACGACAACATGAACATCAAGCTGACCGACTTTGGGTTCTCCTGCCAGCTGCAGCCCGGCGAGAGGCTCAAAGAAATCTGTGGCACACCTGGCTACCTGGCTCCCGAAATCATACAGTGCTCCATGGACCAGGACCACCCAGGATACGGACTAGAAGTCGATCTCTGGAGCTCGGGGGTCATCATGTACACGCTGCTGGCAGGATCCCCCcccttctggcaccggaagcaGATGCTGATGCTCCGCATGATCCTGAGCGGCAGCTATGACTACAGCTCCCCGGAGTGGGAAGACCGCTCGGACACAGTCAAGGATCTGattTCTCGGCTGCTGGTGGTCGACCCAGAGAAGAGGTACACGGCGACCGAGGCCCTGGCGCACCCCTTCTTCCAGCAGTATGTCGTACAGGAAGTCCGTCTCCTCAGTCCTTACAGGAAGTTCAAGGTCATCTGCATGACTGTGCTGGCCAGCGTCCGGATTTACTACCAGTACCGGCGCGCAAAGCCCGTCACCAAGGAGGTCGTCACCCGAGATCCCTACGCCCTCAAGCCCATCCGCAAGCTGATCGACGCCTGCGCTTTCAAGATCTACGGACACTGGGTGAAGAAGGGCCAGACTCAGAACCGGGCGGCCCTGTTCGAGAACACGCCCAAGGCTGTGCTCCTCTCGCTGGCCGCCGAGGCAGACGACACGCTGGCTTTTCagtaaagaaacacacaaatgatTTGAGTGGAATCGCAGTGCTTCAGCCAGTGCGTCCCCCGAAGGTCTTATTTCAGCACAAAACAGGAGGTGGAAGTCAGTGGCCGAGGGTCCGAGAGCCTAGAGAACTGTAGAAGGATGGCAGGCCATAATGTTCAGTATTGACTTCTTTGTTCAAGCGCTAGAGGTGGCCTCTTTCTGGTTTTATTTCACAACTGTTCCTCATTGAACAGTAAGGAAATTTTTTTTTGAACGAAGCACCTAACAGTTTAATATCATTTTCAATGCAGCCTGACTTTGGCAAGTAACGAATGCACCCGTGTGCGTATTCCCGTGCGTATCACTCTGCCTGTGCCCGACCTAACGCAACGTTCATAGCGGCTTCTGCTGAAAAAACTGCAATTAACCTGTATACTTGAATTAGCAAGGAGTGAAATGTTCAGTGCCTTATGTATTTTGAGACattttgtgtgtgggtttgattttattatctTCAGACTTCTTAATAGGTATGCAGAAGGAATTACAGCGagtttaaacatgtattattgtaCAATAACTATTTTCTTTAGACgataaatgtaaaagtatagGAAAAGCAAAAAGGGAGTTTGAATCTTACGTACTGAAATTGCATGAATAATGAGATACTCCGGTGCAACTTACTCACTGGAACATGTAAATTAACAGGACCTTAGAAAAGCCATAGGATTCAGTCAATGGACAGAATTTCCCCAACAGTGAGATTATGCTGCTTTTAAGATCATGGATCATGGAACAACTTTCCAATCTGAAGTGAAAATGTTCACCCTGTCTTATAGAGGTTCTCTCTCTGGGTTACTACTCTCTAGTTTTCACACGCTTGTGCTTTTAAATTCCCCTTCTCTTTTTGCTAGGAGGAATTACAAGGCTTAATCCCCGACTTGATTTAACTACGTCAGATCCCTACTGCTTGTCAGGCAATTGTGTTTTGTGACATCAGTTTAGTTTTCCTGCTGTAACAGAACTTGCGATAACACTTAGTCCTAAGAAAATGGTCACCCTCtttatggattttaaaaaaatcctgtGTTCACAAATGTTCTGTACTGGTTGGCTGTCTGTGGTCTTGAGGGATAAACACGTCCAGAATAAGCAACATGCGATGTCATAGAAGTCTAATTTCTGCACAAAATGACAGGAGAGGTTTATTCTAGCACTGTTTACCTATTTAATTACACACAATAGGTGCTTCGTATGAGCAGGGTTGTCTCTACTGGTGCAAGCACTTGACAGTTTGACCAAGCTTGAAGTAATATGCTAAGACATCAGAAAGCAACTCTATTTACAATGAGGTGTCAAGGTTTTtggaaatggtttaaaaaaacacgAGCAAAGCTTCACAGTTGAACTCTCTTATCGGATTTGTATATGATAACACTCAGGTTTCAGGTAACCATTTTCGAAtcgattaaaacattttcaaacttgaTCGAACAGGTGGAACACACTGTGACCTGCGAGGATACAGGCgttgctgttttgtattttaaacagcgtatttaaatatgtatatttaagagTATGCTTGTTGTTTTGAGAAATaaagctgtattttaatattcgTTATGAACAAATATCATGCTTCTCTGTGCCCATGTGAGGCCGTTACAACTAATTGTCCTGTTCAGTCCTgagtgttttctgtttctgtgctgaAGGGAAGGTAAACAAGGGATTCTTTATTCTTTACTGAACTGTGAATAATGCAAACGTCTTTACACTCACATTAAAGGACGCTTCTCATTGTGTTTTTCCACATGAATGCATGAATAATTATTATGACAACAATTCAGTTATGAGCCCTTTAAACCCGAGAGAAAAACACAGTACTCGTTTAATGCAGCACTGGAGAA

Function

symbol description
phkg1 Predicted to enable several functions, including ATP binding activity; calmodulin binding activity; and protein kinase activity. Predicted to be involved in glycogen biosynthetic process and protein phosphorylation. Predicted to be located in cytosol. Predicted to be part of phosphorylase kinase complex.

NR:

description
PREDICTED: phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform

GO: NA

KEGG:

id description
K00871 PHKG; phosphorylase kinase gamma subunit

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005702 True 3348 mRNA 0.46 10 7989356 7999100

Neighbor

gene id symbol gene type direction distance location
AMCG00005717 psph coding downstream 11576 7976058 ~ 7977780 (-)
AMCG00005716 NA coding downstream 23096 7954131 ~ 7966260 (-)
AMCG00005715 LOC102799651,LOC107659914,LOC104957508 coding downstream 39222 7918679 ~ 7950134 (-)
AMCG00005718 NA coding downstream 87984 7896346 ~ 7901372 (-)
AMCG00005692 caln1,LOC108277467,LOC107582596,LOC107554278,LOC107672359 coding downstream 120136 7852666 ~ 7869220 (-)
AMCG00005701 abhd11,LOC107715343 coding upstream 24432 8023532 ~ 8025712 (-)
AMCG00005703 LOC108424094,LOC105905016,LOC103377858 coding upstream 37928 8037028 ~ 8066223 (-)
AMCG00005734 NA coding upstream 103845 8102945 ~ 8104214 (-)
AMCG00005733 NA coding upstream 105366 8104466 ~ 8107046 (-)
AMCG00005706 LOC108431303,LOC105027537,LOC106602836,LOC103362281 coding upstream 347060 8346160 ~ 8363063 (-)
G153778 cct6a non-coding downstream 5425 7982030 ~ 7983931 (-)
G153742 NA non-coding downstream 114314 7874787 ~ 7875042 (-)
G153681 NA non-coding downstream 710591 7278504 ~ 7278765 (-)
G153678 vmp1,LOC105021956,LOC107728773 non-coding downstream 787070 7179628 ~ 7202286 (-)
G153638 NA non-coding downstream 935797 7052805 ~ 7053559 (-)
G153980 NA non-coding upstream 575092 8574192 ~ 8588222 (-)
G154010 NA non-coding upstream 730703 8729803 ~ 8730149 (-)
G154126 NA non-coding upstream 988181 8987281 ~ 9024879 (-)
G154150 NA non-coding upstream 1096571 9095671 ~ 9108363 (-)
G154157 blmh,LOC106612652 non-coding upstream 1129670 9128770 ~ 9139826 (-)
G153733 auts2 other downstream 201035 7785554 ~ 7788321 (-)
AMCG00005685 NA other downstream 843549 7109218 ~ 7145807 (-)
AMCG00005674 NA other downstream 1492785 6490255 ~ 6496571 (-)
AMCG00005628 LOC107090330,LOC102220786 other downstream 1755328 6232159 ~ 6234028 (-)
G153342 NA other downstream 1906490 6081235 ~ 6082866 (-)
AMCG00005704 NA other upstream 236 7999336 ~ 8001405 (-)
G153806 NA other upstream 92648 8091748 ~ 8124685 (-)
G154142 NA other upstream 1091322 9090422 ~ 9092573 (-)
G154250 NA other upstream 1426190 9425290 ~ 9434940 (-)
AMCG00005850 NA other upstream 2296499 10295599 ~ 10352782 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_009003 phkg1a coding NC_007126.7 CM002899.2 5722525 ~ 5742531 (-)