AMCG00006119


Basic Information

Item Value
gene id AMCG00006119
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 16498652 ~ 16500578 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006119
ATGGGTGGCTTTCTGACCTTGGTGGAGCCTGTGGTCATCATCAACACGGTGGGCAGCTCTTTCTACGATGCGGCTCTGACGCTGGCGGTCTACAACAGCAGCATGGAGACGGCGCAGGGCCAGAGTGACCGGGCGCAAACTCTCTCCTCCCGCTTCTTCCTCATCTACGGCTCCTTGACTTCCCTCCTGTCCCTGGTCTCCACCGTGCCCCTCGGCCGACTGGCAGATCGCCGGGGGCAGCGGGTGTTATTGGTGGTGCCCCAGGTGGGCTCCATCCTCAGCAAGTCCTTCCTGCTCCTTTTCCTGCTCTTCCGGCTGCCTCTCTGGGTGTTACACCTGGGCTCGGCCCTGCACGGCCTCAGCGGAGGCTCCCCGGCCTACTGGGGCGGAGTGGTGTCAGTGGCGGCGCTGCGGTCTGAGAGGCGGGTGCGGAGTTTGCGTCTGAACACGGTGGAGTTTTTCAGCGGTGTGGCGGGGGTTGCCGGGGGACTGATGTCGGGTTACATCTACCGGATTGGCCAATCTGGCGTTGCTCTAAGCGCTACAGGTTTGCTAGTGTGCGCCACTGGGCTCCTTTACTCTGCGTTTCTCCTCCGGTACCCTCAGCCTTCGAGCGCCGAGGAGCCAGGCGGGAATGGGATCTTGGCAGACTATACTGAGGCGGGGAGGATAGACTTGGGTGCCGTGGCTCTCCTATTCAGCGCCATGATCCTGTTCGTGCTGGGCATGTGTGGCGCCGAGAACGTGCTGTGCCTCTACGTGCtgaagcctcccctctcctgggaCTCGGTGTGGGCTGGCTACGGGCGGGCCGCTACCAATGCCATGTACCTGAGCAGCTTCCTGGGCGTACTGGCGCTCTCCCAGTGGCTCAGTGACCCCGCCCTCATCCTCCTGGGCATCGTCTCCAATTGCACTGGCATGGCCGTCCTGGCGTTCGCCCAACAAAGTTGGGTCTACTTCTTGGCACGTGGCATCATGATGTTTGCCTGTATCCCGATGCCCACCATCAAATCCCAGCTCTCCAAGATCTTGGATGCACAATTGTATGGGCGTGTGTTtggttggctgcagtcgagtcTGGCTCTGACTGACGTTGTGTCCACGGTCCTCTTCACCTCGATCTACCCTTTCACCCTGGACTCGTTCAGCGGCTTTTGCTTCCTGCTGTCCTGCATCATCAGTTACCTGAGTGCCGTGCCCATTCTGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006119 True 1212 mRNA 0.61 3 16498652 16500578

Neighbor

gene id symbol gene type direction distance location
AMCG00006084 ptbp1,LOC106613576 coding downstream 11425 16464012 ~ 16487227 (-)
AMCG00006110 LOC106574064,LOC106613575,LOC105011408 coding downstream 211324 16277086 ~ 16287328 (-)
AMCG00006109 LOC104962492 coding downstream 289974 16190630 ~ 16208678 (-)
AMCG00006108 NA coding downstream 318116 16155306 ~ 16180536 (-)
AMCG00006115 NA coding downstream 422926 16073363 ~ 16075726 (-)
AMCG00006120 NA coding upstream 27644 16528222 ~ 16566157 (-)
AMCG00006117 NA coding upstream 127395 16627973 ~ 16637966 (-)
AMCG00006146 NA coding upstream 147444 16648022 ~ 16660916 (-)
AMCG00006147 NA coding upstream 160374 16660952 ~ 16681468 (-)
AMCG00006144 med16,LOC106613614 coding upstream 194134 16694712 ~ 16703925 (-)
G156228 NA non-coding downstream 427124 16066669 ~ 16071528 (-)
G156225 NA non-coding downstream 435580 16062733 ~ 16063072 (-)
G156207 NA non-coding downstream 498613 15994787 ~ 16000039 (-)
G156203 NA non-coding downstream 551125 15947208 ~ 15947527 (-)
G156113 NA non-coding downstream 882865 15615562 ~ 15615787 (-)
G156344 NA non-coding upstream 174220 16674798 ~ 16676047 (-)
G156378 NA non-coding upstream 364520 16865098 ~ 16922863 (-)
G156668 NA non-coding upstream 1631751 18132329 ~ 18137505 (-)
G156670 NA non-coding upstream 1637941 18138519 ~ 18144775 (-)
G156696 NA non-coding upstream 1933028 18433606 ~ 18434245 (-)
AMCG00006083 NA other downstream 36487 16454284 ~ 16462165 (-)
G156206 klhl26,LOC107680559,LOC107597147 other downstream 541562 15954076 ~ 15957090 (-)
G156088 rps15,LOC107680474,LOC107685215,LOC107578086 other downstream 1007010 15433432 ~ 15491642 (-)
AMCG00006102 slc5a5 other downstream 1490673 14998500 ~ 15007979 (-)
AMCG00006043 NA other downstream 1714372 14782506 ~ 14784280 (-)
AMCG00006118 NA other upstream 4786 16505364 ~ 16521689 (-)
G156341 NA other upstream 150962 16651540 ~ 16680772 (-)
AMCG00006127 NA other upstream 447419 16947997 ~ 16963650 (-)
G156907 NA other upstream 2774622 19275200 ~ 19293820 (-)
AMCG00006201 LOC105903982,LOC108433090,LOC106600049,LOC105020399,LOC107384124,LOC106569512 other upstream 2948353 19448931 ~ 19463205 (-)

Expression


Co-expression Network