AMCG00006160 (mllt1,LOC108432507)


Basic Information

Item Value
gene id AMCG00006160
gene name mllt1,LOC108432507
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 18774925 ~ 18780393 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006160
ATGCAGATTTGGGAGAAATGGCTTCAGGTCCACCTGGAGCTAAAATGGCAAACATTACTGCACTTCGAGAGGCAGTGCACAGTGCAGGTGAAATTGGAGCTGGGGCATCGGGCACAGCTACGAAAGAAGCCCACATCAGAGGGGTTTACTCACGACTGGATGGTATTTGTGCGGGGGCCTGAGGTGTGTGACATCCAGCATTTTGTGGAGAAAGTGGTCTTCAGGCTGCACGAGAGCTTCCCCAAGCCCAAGAGAGTTTGTAAGGAACCCCCGTACAAAGTGGAAGAGTCTGGTTATGCTGGCTTTCTCATGCCCATTGAAGTCTACTTCAAGAACAAGCCTGCGAGAGGGGAATCTTTCAACCATAGCACCTATAGCACCAACTATAGcagtaaattgtaa

Function

symbol description
mllt1 Predicted to be involved in regulation of transcription, DNA-templated. Predicted to act upstream of or within negative regulation of protein kinase activity. Located in cytosol; fibrillar center; and nucleoplasm. Part of transcription elongation factor complex.

NR:

description
PREDICTED: protein ENL isoform X2

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component

KEGG:

id description
K15187 MLLT1_3, ENL, AF9; YEATS domain-containing protein 1/3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006160 True 402 mRNA 0.50 4 18774925 18780393

Neighbor

gene id symbol gene type direction distance location
AMCG00006158 mllt1,LOC106584372 coding downstream 12277 18749834 ~ 18762648 (-)
AMCG00006159 rfx2,LOC106584375,LOC106613840 coding downstream 106544 18637497 ~ 18668381 (-)
AMCG00006140 gadd45b,ga45b,LOC106573930 coding downstream 330843 18441462 ~ 18444082 (-)
AMCG00006165 NA coding downstream 742756 18013807 ~ 18032169 (-)
AMCG00006163 LOC101062949 coding downstream 776854 17984542 ~ 17998071 (-)
AMCG00006171 NA coding upstream 34024 18814417 ~ 18821406 (-)
AMCG00006172 NA coding upstream 52937 18833330 ~ 18852079 (-)
AMCG00006161 myo1f,LOC108413823,LOC108264988,LOC105011638 coding upstream 73300 18853693 ~ 18887143 (-)
AMCG00006166 gipc3,LOC106574151 coding upstream 300646 19081039 ~ 19116587 (-)
AMCG00006184 LOC108437281,LOC105889513 coding upstream 458972 19239365 ~ 19269061 (-)
G156791 NA non-coding downstream 32716 18741351 ~ 18742209 (-)
G156717 NA non-coding downstream 236682 18533183 ~ 18538243 (-)
G156716 NA non-coding downstream 242478 18532062 ~ 18532447 (-)
G156696 NA non-coding downstream 340680 18433606 ~ 18434245 (-)
G156670 NA non-coding downstream 630150 18138519 ~ 18144775 (-)
G156812 NA non-coding upstream 60408 18840801 ~ 18843916 (-)
G156846 NA non-coding upstream 175330 18955723 ~ 18956035 (-)
G156847 NA non-coding upstream 175710 18956103 ~ 18956315 (-)
G156862 NA non-coding upstream 251737 19032130 ~ 19032334 (-)
G156929 NA non-coding upstream 609684 19390077 ~ 19390399 (-)
AMCG00006127 NA other downstream 1811275 16947997 ~ 16963650 (-)
G156341 NA other downstream 2094153 16651540 ~ 16680772 (-)
AMCG00006118 NA other downstream 2253236 16505364 ~ 16521689 (-)
AMCG00006083 NA other downstream 2312760 16454284 ~ 16462165 (-)
G156206 klhl26,LOC107680559,LOC107597147 other downstream 2817835 15954076 ~ 15957090 (-)
G156907 NA other upstream 494807 19275200 ~ 19293820 (-)
AMCG00006201 LOC105903982,LOC108433090,LOC106600049,LOC105020399,LOC107384124,LOC106569512 other upstream 668538 19448931 ~ 19463205 (-)
G157059 NA other upstream 1929406 20709799 ~ 20712216 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) LOC110521505 LOC106584372 misc NC_050570.1 CM025857.1 20067742 ~ 20083690 (-)