G154025


Basic Information

Item Value
gene id G154025
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 8781989 ~ 8805304 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU194003
AGATCTTTTAACtacttttaatgaaaagattgtttttaaaaatgaaaaaaaatgaattttaattgtttttaaagaattagttgattttaaatgcacttgttttttttttttttttatttataaaacagttcaAGCTTTATTAATTCCCAGACTACAGAGTACAGAGTAGAACTGCACAACACAGTCGCATGTACAATTAACAAAACGGGTCCTGTGGAAGTAATGAAGTAATGCAGTTTCCAAACCATGTGGATCCGGAAGTAAATCTGCGACTTAATTCACACTGACCAATATAGagtaaactataaaaaaaacaattaaacaaatccaTTTACATGAGCACAATTCATGAACAGGGATAAAACTATCTTGTCACTTTATTGTATTGAAGATTTACCTTCACAGAATTAACCATTGTACCGAAACAACCCCAAAAAAGAGTCCACCTTTGATAAGattcaaacagaaaatgcaccACAGGGAGGGAACTCCAACACCCGAGGGAGTCTCTGAACGGGAGCCACCTGCTCTCTGGTGCGCGGTGCCGTCCGGGCCTGGCTCCGTGTGCCATTCCATGTTGAATATCAACAGTAGCGGTTGGGGGGGTGGGTCGGCGGTGGTTTGGGGGGTCCGAACGCTCTAGGCGTACATGTCCTCTCGGTCGGCGTTGTAGATCTCGCCCTCCTGCAGGGAGGCGAAGTTCAGGAAGTGCGAGGGCCGGTGCACCTCGTGGTAGAACTCCTTGGGGTTGGCCAGCTGCAGGTCGTACTTCATGTTGGGGTCGTGGCGCACa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU194003 True 793 lncRNA 0.43 2 8781989 8805304

Neighbor

gene id symbol gene type direction distance location
AMCG00005755 NA coding upstream 5117 8772389 ~ 8776872 (+)
AMCG00005754 NA coding upstream 19919 8756975 ~ 8762070 (+)
AMCG00005757 unc119b,LOC107713212,LOC108431312,LOC107704800 coding upstream 66265 8707225 ~ 8715724 (+)
AMCG00005756 crybb1,LOC105898201,LOC102220912,LOC106612853 coding upstream 85001 8695146 ~ 8696988 (+)
AMCG00005738 NA coding upstream 107172 8673120 ~ 8674817 (+)
AMCG00005791 NA coding downstream 49078 8854382 ~ 8862372 (+)
AMCG00005790 NA coding downstream 57174 8862478 ~ 8864223 (+)
AMCG00005789 NA coding downstream 64605 8869909 ~ 8873125 (+)
AMCG00005788 NA coding downstream 71106 8876410 ~ 8883801 (+)
AMCG00005742 NA coding downstream 91973 8897277 ~ 8904084 (+)
G153955 NA non-coding upstream 51834 8729803 ~ 8730155 (+)
G153859 NA non-coding upstream 430240 8345678 ~ 8351749 (+)
G153816 NA non-coding upstream 503915 8251301 ~ 8278074 (+)
G153747 NA non-coding upstream 894209 7887566 ~ 7887780 (+)
G153702 NA non-coding upstream 1420672 7360384 ~ 7361317 (+)
G154091 NA non-coding downstream 216646 9021950 ~ 9071747 (+)
G154143 NA non-coding downstream 288605 9093909 ~ 9094670 (+)
G154147 NA non-coding downstream 295125 9100429 ~ 9108370 (+)
G154175 NA non-coding downstream 386992 9192296 ~ 9194187 (+)
G154252 NA non-coding downstream 635189 9440493 ~ 9441381 (+)
AMCG00005720 NA other upstream 274892 8498502 ~ 8507097 (+)
G153815 NA other upstream 551399 8213904 ~ 8230590 (+)
AMCG00005660 LOC106603524 other upstream 994118 7749183 ~ 7787871 (+)
AMCG00005694 NA other upstream 1447418 7307058 ~ 7334571 (+)
G153675 NA other upstream 1516018 7260677 ~ 7265971 (+)
AMCG00005787 NA other downstream 23274 8828578 ~ 8854100 (+)
G154251 NA other downstream 630596 9435900 ~ 9438269 (+)
G154283 NA other downstream 782498 9587802 ~ 9589798 (+)
G154330 NA other downstream 1076078 9881382 ~ 9883955 (+)
AMCG00005802 NA other downstream 1259856 10065160 ~ 10089769 (+)

Expression


Co-expression Network