G154636 (LOC108435919,LOC108271001)


Basic Information

Item Value
gene id G154636
gene name LOC108435919,LOC108271001
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 10913397 ~ 10915729 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU194757
TTTAAAGATGTGTTTAATGTCTGCCAtgagtatttacattttatttcaagcacacataaaagcatttacaaagGGACAAGATAATACAGAACTGGGAGCACATCGATCTGCGCAATACTAGCTCGATTTGTACATTCATTGGTGTTCGTATATTCACTTTATtcattagtttctttaatttatgGATTTCTTGATGCATCCAGGCGGGATCAGATGAGATGGAGAAGAATCGGAGTTGGTTTCTGCTGCTCCCTCCCTGGCCAGATCAGTTCAGTTcaagtttttactttttctcaAGTGCTATGATGGGAGACGTCaggataattttttttgtatccctcCCCAGCCCCCTCAGTTGGCGGTTAAAGTTGCTCATACACACGGATGTATTAATTACAAGAACTGCAGTGATAACGAGTCATCTTTTAACGTCTTCAAGGCATGCGCTGCAGCCCACTGGGGGCCACAGTTACAAACACTGCATTGTGTCACATTTACACAGTATTTTACACAGGTCAACCCCCGCCCTCTCTCAACCCCCACCAGGCACATCTGTCCACCTCTGGGGACCCCTGTGCCATACCCAGAGCAGGCCGGGAAATAAAAACGAGCAAACGAGcggaggggggtggggtggtgtcGGCGAACCTCGGGGTTAGAGACCCTGCATGCCGTCACCGTAAAGCGCAGAGTGTGGGAGCAGCCCCGGTCAGAATCGGCACATGTCCCTTaacctggggggggggggatgtaaTGTACAAGGTCAGGGGGTCGGTCACTGTGTACAACGCAACCCTTGACCTCCCTCCCCTGTCCTCCATCCCTTGCTCCCCCTCTCATTCACTTACTCACCCTCCCCGTCCCATCCTCGCTCTCTCAGTAGTCCAGTAACCTGACCCACCCCTCCGACCTGACACCTATGGCTGACCTCTTGCCACCAGGGAGGTCAGCTTGTTCAGCGAAGTGCAGGACCCCCCCGAGGTCAGCCATAGGTCACCACTGCGCCGGGGAGGAGGGGGCGGGCGTTGGCGGGAGAAGGGCGTGGGGaacaggggtcaggggtcactaTGTGTAGAAGATGATCTCGGGCACTTGGCCGTCCTCCACTGAGGTGCCGTTGTTGTTGCCAGCGGCGTAGCAGAAGGTGAAGCAGGTCTTGGCGCCGGTGGACGGCGACTCGTGGGTCACCTTGCGCATCCCCTTCGTGCCGTAGTGAGAGTCTGGGCCCCTTGAGTGTGGCACAAGCGGTGTAGTTGACGTTGGGCAGAACCTCCACTGGTTCTTTGAACATGACCCGGAAGGTGTTGGCAGAGCCGTCACAGCTGAAACCCGTGTCATTCTGACCCAGGACTGTGTTACTGTCTGTGTGGATAAtctgagggagggagacagtTAAAACGCAGgtagaaacacaaaacacacgcTACACACATgtactacacatacacacacgcagcACAAACGTACCTGGATGTTGACCTGGTAGTCTGTGGGCCCATGTATCGACCCGTACAGCCCGAAACCCACCACGAAGATCCGCCTGTTCACTGAGAacctgagagagtgagagtgagagtgagaaatTGCTTAATTGGCCTAGTGATCTATTCTCCCTCTCCATTTCCCtgcctctcctcccctctcctctcctcctctcaccGGATGCGGTCACTGGTGCCGCTGTAGCCCCAGCGACTCTCCACCTGTGCAAAGCGGGTGATGCTGCACTCCTTGCCCCGTAGGCAGCAGCGTGGCCGGTCGATGAACTCCACCCGCGGCTTGGGGTTCACCGTGAAGTGCAGGAACAGGCTCACCACCTCACGGTCCGTCAGGATACCCGACTGGGCCGGGCCTGCCGAGGAGGGTGGGATGATGGAGTGAGAGAGATTAAATGACACAATGCCTGAAAACACTCTTTGACTGTGACAGTGTCCAACAGgttcactgacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagatgggggGGGATGTTGTATTACCAGCTGCAAACTCCTCGATGGTCATGAGGGGGAACCGGATGAGGGCGAGGCTCTTGCCCAGGACACGCCGCTTGTTCTCGGGCGTCGGCTGCAGCTGCTGCCGCCCTGCCTCGGCCTCGGCCCAGCGCACCGCCGCGCCAAACAGACGCACCTCCCGCACCCCCAGCGTGTCGCGCTCCAGCACCGCCACCAGCGTGtc

Function

NR:

description
PREDICTED: BTB/POZ domain-containing protein 2-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU194757 True 2230 TUCP 0.56 2 10913397 10915729

Neighbor

gene id symbol gene type direction distance location
AMCG00005867 eef2b,ef2,LOC106613766,LOC107552698 coding upstream 725 10906357 ~ 10912672 (+)
AMCG00005826 sirt6,LOC107667852 coding upstream 27150 10882619 ~ 10886247 (+)
AMCG00005833 NA coding upstream 66539 10845536 ~ 10846858 (+)
AMCG00005836 aes,chico,LOC103379965,LOC106574496,LOC107558286 coding upstream 200838 10701010 ~ 10712559 (+)
AMCG00005837 NA coding upstream 216396 10696777 ~ 10697001 (+)
AMCG00005868 NA coding downstream 4219 10919948 ~ 10923547 (+)
AMCG00005869 unc13a coding downstream 14065 10929794 ~ 10962687 (+)
AMCG00005813 NA coding downstream 177102 11092831 ~ 11097368 (+)
AMCG00005812 NA coding downstream 182680 11098409 ~ 11103223 (+)
AMCG00005815 LOC105011560,LOC106515027,LOC106613776,LOC103149819,LOC103463645 coding downstream 224069 11139798 ~ 11140832 (+)
G154583 NA non-coding upstream 245136 10667998 ~ 10668261 (+)
G154574 NA non-coding upstream 336960 10575979 ~ 10576437 (+)
G154505 NA non-coding upstream 387345 10523967 ~ 10526052 (+)
G154473 NA non-coding upstream 423543 10419906 ~ 10489854 (+)
G154451 NA non-coding upstream 609900 10302957 ~ 10303497 (+)
G154722 NA non-coding downstream 81920 10997649 ~ 10999389 (+)
G154775 NA non-coding downstream 258666 11174395 ~ 11180237 (+)
G154815 dot1l non-coding downstream 446276 11362005 ~ 11362233 (+)
G154816 NA non-coding downstream 454695 11370424 ~ 11370912 (+)
G154831 NA non-coding downstream 463051 11378780 ~ 11379289 (+)
AMCG00005834 LOC108271164,LOC108430094,LOC107393192,LOC107719559,LOC107699414 other upstream 176771 10721752 ~ 10736626 (+)
AMCG00005835 LOC107586405 other upstream 198690 10679937 ~ 10714707 (+)
G154499 NA other upstream 397007 10512504 ~ 10516390 (+)
G154486 NA other upstream 441766 10470543 ~ 10471631 (+)
AMCG00005821 NA other upstream 443991 10462537 ~ 10469406 (+)
AMCG00005840 LOC100304646,LOC107384145 other downstream 91069 11006798 ~ 11010354 (+)
G154756 NA other downstream 167432 11083161 ~ 11086011 (+)
G154798 NA other downstream 404235 11319964 ~ 11361770 (+)
AMCG00005907 LOC105011584,LOC103026129,LOC106584418,LOC104949087,LOC106613791 other downstream 490577 11406306 ~ 11409672 (+)
AMCG00005886 ssbp4,LOC107588873,LOC107690032,LOC107721784,LOC107676978,LOC107729707 other downstream 686173 11601902 ~ 11610151 (+)

Expression


Co-expression Network