Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00006478 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 5593752 ~ 5596707 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00006478 | True | 585 | mRNA | 0.48 | 4 | 5593752 | 5596707 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00006475 | NA | coding | upstream | 102583 | 5490882 ~ 5491169 (+) |
| AMCG00006469 | dld,LOC106561021 | coding | upstream | 160116 | 5427730 ~ 5433636 (+) |
| AMCG00006465 | NA | coding | upstream | 247760 | 5322363 ~ 5345992 (+) |
| AMCG00006466 | NA | coding | upstream | 282336 | 5308497 ~ 5311416 (+) |
| AMCG00006467 | NA | coding | upstream | 292376 | 5243778 ~ 5301376 (+) |
| AMCG00006480 | slc2a13,LOC106609118,LOC106575984,LOC103369283 | coding | downstream | 102910 | 5699617 ~ 5724043 (+) |
| AMCG00006479 | NA | coding | downstream | 166647 | 5763354 ~ 5769646 (+) |
| AMCG00006484 | abcd2,LOC107566844,LOC107689723,LOC107689245,LOC105891163,LOC106609116,LOC106575983 | coding | downstream | 187030 | 5783737 ~ 5798307 (+) |
| AMCG00006485 | NA | coding | downstream | 212237 | 5808944 ~ 5854451 (+) |
| AMCG00006483 | cpne8,LOC108427072,LOC108279828,LOC101074159,LOC102297242 | coding | downstream | 322223 | 5918930 ~ 5958050 (+) |
| G109933 | NA | non-coding | upstream | 47316 | 5546207 ~ 5546436 (+) |
| G109837 | NA | non-coding | upstream | 240582 | 5352456 ~ 5353170 (+) |
| G109786 | NA | non-coding | upstream | 549119 | 5044416 ~ 5044633 (+) |
| G109780 | NA | non-coding | upstream | 571574 | 5021296 ~ 5022178 (+) |
| G109779 | NA | non-coding | upstream | 573349 | 5018089 ~ 5020403 (+) |
| G109978 | NA | non-coding | downstream | 202893 | 5799600 ~ 5804559 (+) |
| G110024 | NA | non-coding | downstream | 387083 | 5983790 ~ 5984250 (+) |
| G110081 | NA | non-coding | downstream | 621824 | 6218531 ~ 6220086 (+) |
| G110147 | NA | non-coding | downstream | 1199042 | 6795749 ~ 6795994 (+) |
| G110161 | NA | non-coding | downstream | 1259173 | 6855880 ~ 6857998 (+) |
| AMCG00006459 | NA | other | upstream | 459037 | 5127357 ~ 5134715 (+) |
| AMCG00006460 | wasl,wasla,LOC107698525 | other | upstream | 486730 | 5094271 ~ 5107022 (+) |
| G109795 | wasl,wasla,LOC105018628 | other | upstream | 495054 | 5080881 ~ 5098698 (+) |
| G109781 | NA | other | upstream | 567846 | 5024895 ~ 5025906 (+) |
| AMCG00006445 | NA | other | upstream | 1066014 | 4524806 ~ 4527738 (+) |
| G110023 | NA | other | downstream | 382355 | 5979062 ~ 5982909 (+) |
| AMCG00006501 | fam19a5,LOC107552289,LOC106561036,LOC107721159,LOC103356475 | other | downstream | 923158 | 6519865 ~ 6588399 (+) |
| G110163 | LOC100846954 | other | downstream | 1315169 | 6911876 ~ 6912254 (+) |
| G110279 | NA | other | downstream | 2056965 | 7653672 ~ 7655194 (+) |
| G110445 | NA | other | downstream | 2579053 | 8175760 ~ 8176786 (+) |
