AMCG00006698


Basic Information

Item Value
gene id AMCG00006698
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 14808861 ~ 14818516 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006698
GGTTGGGTCATTAATTGGGTTGGgctaataatacattgtatccCTGAATAACAAATaatctaagaaaataaaaaaacaaataaacagtagTGCAAAGAAGTAAACTGGGAAATCTGCGGTGAAATTCCCCAAAATaacaattgaattaaataacacTCCTGAAAATAGAATAGAAACCATTATTGGCAGGAGGCGAAATTGGGTTATAACGTCAATACCGCCATTGCAAGCCTGCGGGACGAGCGCTTCTGCAGCTGCCGTTTCAGGAACTCATTTCAATATTTACCTCCCCACCCACTTGACGTGTACCGGAGCATTGCCGCAACTAGCATCGCCTGGTGTCAAACTTAAAAACCTCTGAAGATGGCAGTCAACAAATGCGTGAAGTATTTACTATTCCTCTTCAACTTGCTCTTCTGGATTAGTGGATGCATCATACTTGCAGTTGCAATTTGGCTACGTGTGAGCAACAATGCTAACAAGgtcaCTCAGGTGTCTGTTCCTGGCATAGACCTGCTAATTGCCATTGGCGTGATCATTATGATCCTCGGGTTCCTTGGCTGCTGTGGTGCCATTCGAGAGAGCAAAGTCATGCTTATGCTGtttttcaTTGGTCTTCTCCTCATCTTCATCCTCCTGCTGGCAGCTGGCATTCTTGGAGCTGTTGGTGAAAACAAAATTAATGACTGGATCCAAGAAAGCCTGAAGAAACTTCTTCCATTGTCATCACAACCTCCAGATGTACAGACTGATCTCCAAGCTCTAGAAGTACAGGGTAAATGCTGTGGATTAGTCAATGGATACAGTGACTGGGGTTCCAACATCCCAACATCCTGTAACTGCACCGATACCTCTGCACCGTGCCAGACATTTGGGACTCGCAATTTGTACAAAACGCCTTGTATGACATTTGTGATAGCATTTATGAAGCAGAACTTGACTGTTGTTCTGGGAATTGCCTTTGCAATTGCTATCCTCATGatCTTCGGCATGAGCTTGGCAATGACGCTTTACTGCCAGATTCGTAGGAAAGAGGCTGGTCAAGCATGAAGAGTCAATGCTTAAATGTCAACTGTCAATGTGGGCTGTAAGAATACACTTTAAGTGAAGAGAGATTTGCAATGGAAATGGGTTTTAACTAATTTCACTTTCGTTTAGCCGTTTATACTTTTTtgattgttaattaataataaagttccAAATGTATGCATAATGTAAAGATTGGctaaaaatgctttgtttttccttcataggtttgcatgtatgtttttacttaaaataaagatCAAATTCTAAATCATACCTAACCATccttcttttgaaaaaaaaataataataataataaagaaaaggggCAGTGCTCTCCATTTGAATGAATGTAATGCTTTTACAACAATACTGACTTTTCTTGGATTTACGAGTATGTGCATGAATTCTGTAAGTTGTCAGACTGGCTTAAAACTCCTTCTTTGtgtgcacaaaacaaatgtagttttGAACAGTTGAACATTTTTTCTAGTACACTAGTGTGAACATGCCGAATTATATCTTAGATTTGGAAGATTATTGTTGTGCTACTTCAGATTACCATTTTTCAAggcatatatattgttttgctctgcttttgttttctaaaaacaaaactacaaaaaacacCTATTTAATTACTGATtggatatttaaatgtaatccaggaatatttatattatatccACAAAGATATAGATGCATAATCTAGCTTCctgtttgtgatttatttttgtatcaactttaataaaactttttttattattgcaaatgTTCTGATTGTTAAACTGCtggaatgtttttaatattggcattatatataatgcagCTATAACATTGTTAATCTGTTTTGATTGTGTAACTAAATTTACCTCAATGTTTAAAGTGTTGCTTATTTATTAGTCTGTGACTGACTGTATTGTCTAGCATGACTTCCTGGAGATTAAACTTTATACTAAACCATCTCCCAATCATttagttttcatgttttgttataAAACTACCAAAAGAAACCTACATTTGTTCAGCTTGTTCTGATAGAATGATTAGTAATtagcttattttaaataattgacaTTTGTGTCCATTTCATAAGCTTTTACAGGTTTGATCTCATTGTTTTCACTTCAGCAATATGAACAATATGTCTGAATTGGATTTACAGACTGTGGgtatttttagattttcttgCATGAATTGCATTTATGAGCCCCCATTTTAGAGAGAATACTCTGTTACACCTGTAATCATAGAAAAGTGCTCTCTGTCATCCAATAATTAAAGGATTGGGTTTAgccaggtttgttttttctcactgCCTTGAATGAGCCCTCTTATTGACAATGAAACCGC

Function

GO: NA

KEGG:

id description
K17349 TSPAN8; tetraspanin-8

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006698 True 2379 mRNA 0.36 8 14808861 14818516

Neighbor

gene id symbol gene type direction distance location
AMCG00006696 NA coding downstream 143062 14644607 ~ 14665799 (-)
AMCG00006695 NA coding downstream 176090 14586749 ~ 14632771 (-)
AMCG00006690 LOC103382512 coding downstream 420475 14376328 ~ 14388386 (-)
AMCG00006687 NA coding downstream 442374 14365642 ~ 14366487 (-)
AMCG00006681 NA coding downstream 538170 14252185 ~ 14270691 (-)
AMCG00006702 NA coding upstream 87032 14905548 ~ 14927342 (-)
AMCG00006706 kcnc2,LOC103383062 coding upstream 746083 15564599 ~ 15574755 (-)
AMCG00006707 NA coding upstream 808700 15627216 ~ 15631171 (-)
AMCG00006711 NA coding upstream 868176 15686692 ~ 15691047 (-)
AMCG00006712 NA coding upstream 883858 15702374 ~ 15704607 (-)
G111630 NA non-coding downstream 13912 14794718 ~ 14794949 (-)
G111626 NA non-coding downstream 74690 14733170 ~ 14734171 (-)
G111622 NA non-coding downstream 78392 14728971 ~ 14730469 (-)
G111481 NA non-coding downstream 434551 14336701 ~ 14374310 (-)
G111478 NA non-coding downstream 496837 14311727 ~ 14312024 (-)
G111728 NA non-coding upstream 718960 15537476 ~ 15537836 (-)
G111730 NA non-coding upstream 739427 15557943 ~ 15558201 (-)
G111736 NA non-coding upstream 839482 15657998 ~ 15659412 (-)
G111759 NA non-coding upstream 910097 15728613 ~ 15729533 (-)
G111765 NA non-coding upstream 923930 15742446 ~ 15742715 (-)
G111621 NA other downstream 54891 14712017 ~ 14753970 (-)
G111489 NA other downstream 444439 14360228 ~ 14364422 (-)
AMCG00006663 hmga2 other downstream 1305633 13455432 ~ 13503228 (-)
AMCG00006641 mrps33,LOC106591474 other downstream 1930205 12876292 ~ 12878656 (-)
AMCG00006625 c4h11orf98,c8h11orf98,cunh11orf98,c19h11orf98 other downstream 2668456 12137182 ~ 12140405 (-)
G111767 LOC107575789 other upstream 934305 15752821 ~ 15753235 (-)
AMCG00006719 NA other upstream 1062614 15881130 ~ 15896869 (-)
G112059 NA other upstream 2814375 17632891 ~ 17633445 (-)
AMCG00006754 NA other upstream 3520754 18339270 ~ 18366562 (-)
AMCG00006773 tmem243b,tmem243 other upstream 4804639 19623155 ~ 19631895 (-)

Expression


Co-expression Network