AMCG00006687


Basic Information

Item Value
gene id AMCG00006687
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 14365642 ~ 14366487 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006687
ATGGGAAACACAATCCGAGGAGCCATCGCCTTCGTTCCCTCTGAGAAGTGCCAGAGATTCCTGGTGGGGGAGCTGAAGGAGATGCCCATGGACCGCATGGTGGACCTCAGCGGGAGGCAGCTGCGGAGGGTCCCCCTATCAGTGTGCTGCTTCGGCGAGCTGGTCAAGCTCTACCTGAGCGACAACAACCTGCGCAGCCTCCCCCCGGAGCTGGAGAGCCTGCACAAGCTCCAGATCCTGGCGCTGGACTTCAACCTCTTTGGAGAGCTGCCACTGGTGGTGTGCAGTCTCAGGCAGCTCAACATCCTCTACCTGGGAAACAACCGGCTGCACGCCCTGCCCTGGGAGCTGAGCCTGCTCACCGAGTTGAAGACGCTGTGGATCGAGACCAACTACTTCACCGAGTTCCCCGAGGTCATCTGCCAGCTGAGCAACCTCAAGACCCTCCACATGGGCTACAACCAGCTCCACTCCCTGCCTGAAGAGCTGTGCGGCCTGCAGGAGCTGCGCAGCATCTGGCTCTCCGGCAACCAGCTGACCGAGTTTCCCGACGTGCTGCTGGAGATGCACTTCCTGGACGTGATCGACGTCGACAGGAACAAGATCCGCCGTTTCCCCAGCCTGGTGCACCTGAAGGGCCTCAAGCTGGTCATCTATGACCACAACCCCTGCGTCAACGCCCCCGCCGTGTCAGAGGGGGCCCGGAGAGTGGGCCGCTGGGCCAACAACAAAGAGGAGGTCACAGAGGAGAAAGGGAAGAGAGCCGAGCCACCGCCTGCGCCAACTGAAACCGAGGAGCCCCCTACTGAGATGCAGGCCGAGCCATGCCAAGAACCTGTGGCCTAG

Function

GO:

id name namespace
GO:0001947 heart looping biological_process
GO:0060047 heart contraction biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006687 True 846 mRNA 0.62 1 14365642 14366487

Neighbor

gene id symbol gene type direction distance location
AMCG00006681 NA coding downstream 94951 14252185 ~ 14270691 (-)
AMCG00006678 NA coding downstream 211310 14139065 ~ 14154332 (-)
AMCG00006676 NA coding downstream 232555 14130780 ~ 14133087 (-)
AMCG00006675 NA coding downstream 241884 14120438 ~ 14123758 (-)
AMCG00006677 NA coding downstream 262572 14101422 ~ 14103070 (-)
AMCG00006690 LOC103382512 coding upstream 9841 14376328 ~ 14388386 (-)
AMCG00006695 NA coding upstream 220262 14586749 ~ 14632771 (-)
AMCG00006696 NA coding upstream 278120 14644607 ~ 14665799 (-)
AMCG00006698 NA coding upstream 442374 14808861 ~ 14818516 (-)
AMCG00006702 NA coding upstream 539061 14905548 ~ 14927342 (-)
G111478 NA non-coding downstream 53618 14311727 ~ 14312024 (-)
G111451 NA non-coding downstream 65786 14182781 ~ 14299856 (-)
G111452 NA non-coding downstream 70093 14290467 ~ 14295549 (-)
G111466 slc35e3,LOC106609860,LOC106576641,LOC107737854,LOC107710682 non-coding downstream 119468 14244602 ~ 14246174 (-)
G111448 rap1b,LOC106576640,LOC107695907 non-coding downstream 150826 14168131 ~ 14214816 (-)
G111622 NA non-coding upstream 362484 14728971 ~ 14730469 (-)
G111626 NA non-coding upstream 366683 14733170 ~ 14734171 (-)
G111630 NA non-coding upstream 428231 14794718 ~ 14794949 (-)
G111728 NA non-coding upstream 1170989 15537476 ~ 15537836 (-)
G111730 NA non-coding upstream 1191456 15557943 ~ 15558201 (-)
G111489 NA other downstream 1220 14360228 ~ 14364422 (-)
AMCG00006663 hmga2 other downstream 862414 13455432 ~ 13503228 (-)
AMCG00006641 mrps33,LOC106591474 other downstream 1486986 12876292 ~ 12878656 (-)
AMCG00006625 c4h11orf98,c8h11orf98,cunh11orf98,c19h11orf98 other downstream 2225237 12137182 ~ 12140405 (-)
AMCG00006622 lrp6 other downstream 2235259 12071390 ~ 12130383 (-)
G111621 NA other upstream 345530 14712017 ~ 14753970 (-)
G111767 LOC107575789 other upstream 1386334 15752821 ~ 15753235 (-)
AMCG00006719 NA other upstream 1514643 15881130 ~ 15896869 (-)
G112059 NA other upstream 3266404 17632891 ~ 17633445 (-)
AMCG00006754 NA other upstream 3972783 18339270 ~ 18366562 (-)

Expression


Co-expression Network