AMCG00006675


Basic Information

Item Value
gene id AMCG00006675
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 14120438 ~ 14123758 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006675
GTGCAGTGCAAGGGCACACAGAGCTACACTGCCTCACCCACAAAAGCCCTTATCACACTAACAGACAGGATGAAAGCCCTGTCTGCGGCCGCGGCGCTCCTGTTGCTGATGCTGCAGCAGCTCTCGGGCCCCTGCGGTGCCAAGGAGAGGGGCCTGGGGGCCCGGGAGTGCCTGCAGAAGCACGTCCCCAGGAGCATGCTCACTGAGCTGTTTGAGATGTCCGGCCGCCTGAAAAGCAGCGTCCCGAGGGATGAGATTAAACACAAGAAGCTGCTGCCCAAATTTGGGAAGTCTGTGAAGAAATCAAAAGGAAGCTCTGTGTTAAAAGAGCTGTTGGATTTCTACATCAAGGACGTGTTCAAGAAAGCACAGGTTGACATTGCagataaaaacatattcaattacCTGACCAGGTTGAAAAAGGACTTTGAACACTGTTTGAGCCTGTATCCCAGCACCGTTTCCTCCAAAGACCGCAGGATGATCAAAAGAATGAAGGAGACGTTTATTGAGCTGGACATCCAAGGAGTGTATAAGGCCATCGGAGAGCTGGAAACAGTGGTCGACTGGGTCAGTACCTACATGCAtccagagaagaaaaagaaacaaaaagaaacagtgTCGCAAAAGTGATACACCACAGAGCAAAAGGACCAATCAGAACCGAAAGTGAAAGTCAGAGGTCTGCTCAGCTCGGCCCTCTGTGAGACGGGTAATCGTCTATACCAATACTTGTTATGACCTCCAATTATGTATTGCAATTCAGCAGTGAATCTTCAGTGAAGATTAGAGTTTTGCATACTGTTACCATTGTCCGATTGGTTAAGAAAGCTTGCCACTATCAAAAGCACTTGTAATGTAACAACCTGTTATACTGTCTTCCTGTTTATTACTGTACTGACTGAGTAATGCACAAGCCACAGTGATGCCCCAGCTTTAAAAGGGAAACTCTAGTTGGAAAAGAAACATCTTTTCATAAGGCTAAGATATTGAATGGTACAGGTATTCTTCAGTGagacactttttatttaattgacagattaagttatttaataatatatttttcatattttaagtaatatatattgctttacCTGTTGGTGTCTCCTGTGTAGGACACAGTGTCTCATTTACCTGCCTCAGTGTTGGTATGATATGGGATGAACCATGAGCTGTTACAGACGTGTGCAcatattgtgtatatttgtatttcttaaggAAAAGATATATAATGCTTTGTAAAGTGTATTGAATTGTGTTCATATTGCTAAGGATGTATTGATGATtgtctatttattatttgtaaatgcttttacaaatatttattatttatttataatacaaataaaaacataaaataaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006675 True 1362 mRNA 0.41 5 14120438 14123758

Neighbor

gene id symbol gene type direction distance location
AMCG00006677 NA coding downstream 17368 14101422 ~ 14103070 (-)
AMCG00006673 NA coding downstream 156588 13957481 ~ 13963850 (-)
AMCG00006670 grip1 coding downstream 394009 13668758 ~ 13726429 (-)
AMCG00006669 tmbim4,LOC107757272,LOC107587136,LOC107567270,LOC107694279 coding downstream 504249 13610273 ~ 13616189 (-)
AMCG00006662 LOC106576661 coding downstream 546975 13560457 ~ 13573463 (-)
AMCG00006676 NA coding upstream 7022 14130780 ~ 14133087 (-)
AMCG00006678 NA coding upstream 15307 14139065 ~ 14154332 (-)
AMCG00006681 NA coding upstream 128427 14252185 ~ 14270691 (-)
AMCG00006687 NA coding upstream 241884 14365642 ~ 14366487 (-)
AMCG00006690 LOC103382512 coding upstream 252570 14376328 ~ 14388386 (-)
G111389 NA non-coding downstream 116297 14003753 ~ 14004141 (-)
G111182 NA non-coding downstream 1160810 12954610 ~ 12959628 (-)
G111158 NA non-coding downstream 1359602 12759571 ~ 12760836 (-)
G110957 NA non-coding downstream 2218270 11899963 ~ 11902168 (-)
G110942 NA non-coding downstream 2324096 11794536 ~ 11796342 (-)
G111421 NA non-coding upstream 12570 14136328 ~ 14137746 (-)
G111448 rap1b,LOC106576640,LOC107695907 non-coding upstream 44373 14168131 ~ 14214816 (-)
G111451 NA non-coding upstream 59023 14182781 ~ 14299856 (-)
G111466 slc35e3,LOC106609860,LOC106576641,LOC107737854,LOC107710682 non-coding upstream 120844 14244602 ~ 14246174 (-)
G111452 NA non-coding upstream 166709 14290467 ~ 14295549 (-)
AMCG00006663 hmga2 other downstream 617210 13455432 ~ 13503228 (-)
AMCG00006641 mrps33,LOC106591474 other downstream 1241782 12876292 ~ 12878656 (-)
AMCG00006625 c4h11orf98,c8h11orf98,cunh11orf98,c19h11orf98 other downstream 1980033 12137182 ~ 12140405 (-)
AMCG00006622 lrp6 other downstream 1990055 12071390 ~ 12130383 (-)
AMCG00006621 borcs5 other downstream 2050778 12049494 ~ 12069660 (-)
G111489 NA other upstream 236470 14360228 ~ 14364422 (-)
G111621 NA other upstream 588259 14712017 ~ 14753970 (-)
G111767 LOC107575789 other upstream 1629063 15752821 ~ 15753235 (-)
AMCG00006719 NA other upstream 1757372 15881130 ~ 15896869 (-)
G112059 NA other upstream 3509133 17632891 ~ 17633445 (-)

Expression


Co-expression Network