AMCG00006866


Basic Information

Item Value
gene id AMCG00006866
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 23568155 ~ 23571133 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006866
ATGCCCCCTGCCGAGTTCATCCTGCTGCTGGGATTGCCCAGGTTAACCGATGATATGGTGTCCAATAGGAAGGACAATGAACGCCATGAAGCACTGACCCTCCAGTACTATGACCTGGTCTTGAAGAAGCCATTTGTGGCCACAGTGTCTTGCCCAGTGACCACCACTCCAATGCCTGAACCTCCCAAAGGCCTGTCCATCTCCTGCAGTGAAGTGTGCATGACTGTGCAGCTACCTGGCTGCTTAATTGGTTGCTCTCTGTACCCTGCAGGATGCCAAATCCCCAAGAGACAGCAGGTATCGTGTGGTCCCAAGAGAATCGGCTCCAAAGCCTGCCTTGCCAAGGGTTGCTGTGTAGACTCGGACACTGGCCAATGCTACTATCCTCTGGAAGaatgcactgctgACGGGCACTTTGTCTTTGTGGTCCATCGCACCTCCTCTGTGAACCCTGCCTCCTTGGTGGTTGCTGGCAACAAGTCCTGCACCCCGGTCATCTGCACCGCAGACTTTGCAGTCTTCAAGTTCCCTGTGACTGGCTGTGGAACCCATGCATTTGTGGTGGGGGAGACCACTATCTACCTGGCTGAAGTAATGGCCCTGGCCAGACGCAATAGCCTGAACTATGGAGTCATCACTAGAGACAGGCTCTTCAGGGCTGCAGTGGAACCTATTGCTCCTGGTCTTTGCAAGATCTCCAGCTGCCTGAGGTGA
>TU141622
TGAGGACCCCAATGCTGACGAGCACTGTGCCAGGAAGCCTTGTCCAGGAATGGCCAAGAGATCTGCAGGCCTGCCGGCCCAGTGACTGGGGCTGCAGTGGAACCTATTGCTCCTGGTCTTTGCAAGATCTCCAGCTGCCTGAGATATAGAATACTTGGCTGTGATTTCTCTGGATCAGCGTTGCCGCAGCAATGAGGCGCATCTTGATTTGTGACCAAAGAATCCAAATATAAAATGCCCAAGTTTC

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006866 True 714 mRNA 0.54 5 23568884 23571133
TU141622 False 247 lncRNA 0.52 3 23568155 23569274

Neighbor

gene id symbol gene type direction distance location
AMCG00006864 NA coding downstream 191350 23375367 ~ 23376805 (-)
AMCG00006862 si:ch211-125a15.1,LOC107743608,LOC107726025,LOC107580661,LOC107592225,LOC107658829 coding downstream 265981 23287256 ~ 23302174 (-)
AMCG00006855 NA coding downstream 639750 22881514 ~ 22928405 (-)
AMCG00006847 NA coding downstream 916638 22626401 ~ 22651517 (-)
AMCG00006846 NA coding downstream 960772 22592099 ~ 22607383 (-)
AMCG00006873 LOC108429457,LOC107745572,LOC107549582,LOC105913374,LOC107669036 coding upstream 59906 23631039 ~ 23752269 (-)
AMCG00006876 LOC108429384,LOC108274557,LOC106584451 coding upstream 278512 23849645 ~ 23868247 (-)
AMCG00006877 NA coding upstream 328026 23899159 ~ 23899569 (-)
AMCG00006875 NA coding upstream 349441 23920574 ~ 23925526 (-)
AMCG00006880 tead4,LOC105029403,LOC107549581,LOC107669037 coding upstream 361267 23932400 ~ 23970204 (-)
G113066 hipk2 non-coding downstream 13416 23547797 ~ 23554739 (-)
G113014 NA non-coding downstream 245004 23322933 ~ 23323151 (-)
G113013 NA non-coding downstream 246384 23321077 ~ 23321771 (-)
G112979 NA non-coding downstream 413252 23153868 ~ 23154903 (-)
G112953 NA non-coding downstream 626485 22941459 ~ 22941670 (-)
G113209 NA non-coding upstream 744599 24315732 ~ 24321862 (-)
G113212 NA non-coding upstream 759954 24331087 ~ 24335914 (-)
G113225 NA non-coding upstream 802559 24373692 ~ 24375929 (-)
G113301 NA non-coding upstream 1100655 24671788 ~ 24673498 (-)
G113374 NA non-coding upstream 1820663 25391796 ~ 25392318 (-)
G113050 NA other downstream 160948 23404175 ~ 23407207 (-)
AMCG00006854 NA other downstream 609849 22953176 ~ 22958306 (-)
AMCG00006841 NA other downstream 1370491 22130495 ~ 22197664 (-)
AMCG00006813 NA other downstream 2603593 20854057 ~ 20964562 (-)
AMCG00006807 NA other downstream 2914496 20647320 ~ 20653659 (-)
G113530 NA other upstream 2928882 26500015 ~ 26500681 (-)
G113645 ptn,LOC106609498 other upstream 3831467 27402600 ~ 27527348 (-)
G113775 LOC100846954 other upstream 4696129 28267262 ~ 28292598 (-)
G113833 NA other upstream 5140086 28711219 ~ 28812548 (-)

Expression


Co-expression Network