Gene
RNA
| Item | Value |
|---|---|
| gene id | G111940 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 16862677 ~ 16862967 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU140185 | True | 291 | lncRNA | 0.39 | 1 | 16862677 | 16862967 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00006736 | ppp1r12a | coding | downstream | 900 | 16861107 ~ 16861777 (-) |
| AMCG00006735 | ppp1r12a,LOC107591124 | coding | downstream | 27637 | 16800846 ~ 16835040 (-) |
| AMCG00006734 | NA | coding | downstream | 79120 | 16716275 ~ 16783557 (-) |
| AMCG00006723 | NA | coding | downstream | 800867 | 16051366 ~ 16061810 (-) |
| AMCG00006722 | csrp2,LOC107383140,LOC107087065 | coding | downstream | 823289 | 16032419 ~ 16039388 (-) |
| AMCG00006737 | lin7a | coding | upstream | 197396 | 17060363 ~ 17072397 (-) |
| AMCG00006740 | NA | coding | upstream | 281732 | 17144699 ~ 17271736 (-) |
| AMCG00006741 | ppfia2 | coding | upstream | 463662 | 17326629 ~ 17327076 (-) |
| AMCG00006743 | NA | coding | upstream | 540659 | 17403626 ~ 17406828 (-) |
| AMCG00006746 | slc6a15,LOC102794091 | coding | upstream | 909000 | 17771967 ~ 17793459 (-) |
| G111765 | NA | non-coding | downstream | 1119962 | 15742446 ~ 15742715 (-) |
| G111759 | NA | non-coding | downstream | 1133144 | 15728613 ~ 15729533 (-) |
| G111736 | NA | non-coding | downstream | 1203265 | 15657998 ~ 15659412 (-) |
| G111730 | NA | non-coding | downstream | 1304476 | 15557943 ~ 15558201 (-) |
| G111728 | NA | non-coding | downstream | 1324841 | 15537476 ~ 15537836 (-) |
| G111945 | rs16,rps16,LOC103382554 | non-coding | upstream | 35452 | 16898419 ~ 16901537 (-) |
| G112020 | NA | non-coding | upstream | 246010 | 17108977 ~ 17327586 (-) |
| G112024 | LOC103376870 | non-coding | upstream | 265350 | 17128317 ~ 17135516 (-) |
| G112140 | NA | non-coding | upstream | 1536296 | 18399263 ~ 18408777 (-) |
| G112195 | NA | non-coding | upstream | 1832105 | 18695072 ~ 18745217 (-) |
| AMCG00006719 | NA | other | downstream | 965808 | 15881130 ~ 15896869 (-) |
| G111767 | LOC107575789 | other | downstream | 1109442 | 15752821 ~ 15753235 (-) |
| G111621 | NA | other | downstream | 2108707 | 14712017 ~ 14753970 (-) |
| G111489 | NA | other | downstream | 2498255 | 14360228 ~ 14364422 (-) |
| AMCG00006663 | hmga2 | other | downstream | 3359449 | 13455432 ~ 13503228 (-) |
| G112059 | NA | other | upstream | 769924 | 17632891 ~ 17633445 (-) |
| AMCG00006754 | NA | other | upstream | 1476303 | 18339270 ~ 18366562 (-) |
| AMCG00006773 | tmem243b,tmem243 | other | upstream | 2760188 | 19623155 ~ 19631895 (-) |
| AMCG00006774 | meig1,LOC107581293,LOC107744135,LOC107592215 | other | upstream | 2770126 | 19633093 ~ 19635925 (-) |
| G112420 | NA | other | upstream | 3372889 | 20235856 ~ 20236206 (-) |
