G112140


Basic Information

Item Value
gene id G112140
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 18399263 ~ 18408777 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU140448
tttttttttttctcagcagtaaaaaaacaaacatatactgtccactgataaataataatgttaatcaCCACTTAAAATACGTTCAATCTCTTCCAGTCTCTTTAAGGCCGcttcccttttcttttcaatctcCTTAATCTCTTTTGTAGATTTGGTCTTAGTCCGCTTGTCAGCCTGTGCGTTCTCCTGCTTTCTCGGCTGCTCTTTGCTCTGGCTGGTGTTTTTCGCAGGGGAGGATTTCCGTGCATTCTTGTCATTCTTGGCCTTCTCTGActctgtttttttctcctccacaACTGGGCTTTGGTTGCCATCTACTGGAGATCCCTCTTGTCCTGCAGCATTCAAAGCAGCAATCTTGCCCCTAACTATGCTCAAATGGCGTTGAATGTACTCCTCATGCGGAGCAAGGGCCAAGGTCTCGACCAGGCACTTCTCGGCTTTCACAAGGTCACGCTCCTCAAAGTAAACCACACAGAGGTTGTGCTTCCCCTGCACGTTGGTAGGGTCCATTTCAAGAATCTTTTCAAAGCATTCCTTGGCCCCTTTAGTGTCTTTTTTCTGGTTCATCAGAATGTCTCCTTTAAGGATCAGGGCTTTCGTATGTTGTGGATAATATCTTAATAACTCACTGAGGACAGGTAAAGCATCCAGTTCTCTCCCCGTCTGGGAATACAAAAGAGCTAAATTAAAAAGTGCACTCCGAAAACCTGGCTGCAGTCTGATGGCCTTTTTCATCCATTTCTCTGCCTCTTTGTTCTTATTGTCGTCCATAGCAAGCATCCCAAGGTTGAAGTACCCATTTGCATCACCTGGGTCCTCCTCGATATAAATGAGAAACCTCCGGTTAGCTTCTGGTCTGAGCCTGGCATCACCTAGAAAACGAATGAGCTGCCATTAAAGTGTCTGTCAGCATGATTTCATAATTACAGGATTAAGtgatagtttaaaaaaaaaggcatcaGGGAAGCAAAGGCACACATTCCTTAGGTTACTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU140448 True 998 lncRNA 0.44 2 18399263 18408777

Neighbor

gene id symbol gene type direction distance location
AMCG00006756 NA coding downstream 62211 18218916 ~ 18337052 (-)
AMCG00006757 NA coding downstream 180814 18218173 ~ 18218449 (-)
AMCG00006747 mgat4c,LOC107553950,LOC106573111 coding downstream 407364 17988029 ~ 17991899 (-)
AMCG00006745 NA coding downstream 444442 17945016 ~ 17954821 (-)
AMCG00006746 slc6a15,LOC102794091 coding downstream 605804 17771967 ~ 17793459 (-)
AMCG00006755 NA coding upstream 7139 18415916 ~ 18486164 (-)
AMCG00006759 NA coding upstream 127272 18536049 ~ 18603662 (-)
AMCG00006758 LOC107574886,LOC107572944,LOC107679613,LOC106573116,LOC107665720 coding upstream 233607 18642384 ~ 18646768 (-)
AMCG00006760 NA coding upstream 244727 18653504 ~ 18688236 (-)
AMCG00006761 atp2b1,LOC103370548,LOC107690705 coding upstream 287964 18696741 ~ 18712396 (-)
G112020 NA non-coding downstream 1071677 17108977 ~ 17327586 (-)
G112024 LOC103376870 non-coding downstream 1263747 17128317 ~ 17135516 (-)
G111945 rs16,rps16,LOC103382554 non-coding downstream 1497726 16898419 ~ 16901537 (-)
G111940 NA non-coding downstream 1536296 16862677 ~ 16862967 (-)
G111765 NA non-coding downstream 2656548 15742446 ~ 15742715 (-)
G112195 NA non-coding upstream 286295 18695072 ~ 18745217 (-)
G112205 NA non-coding upstream 474851 18883628 ~ 18886046 (-)
G112270 LOC100136012 non-coding upstream 1000042 19408819 ~ 19418420 (-)
G112287 NA non-coding upstream 1106022 19514799 ~ 19515004 (-)
G112288 LOC108263977,LOC105018424 non-coding upstream 1128428 19537205 ~ 19537793 (-)
AMCG00006754 NA other downstream 32701 18339270 ~ 18366562 (-)
G112059 NA other downstream 765818 17632891 ~ 17633445 (-)
AMCG00006719 NA other downstream 2502394 15881130 ~ 15896869 (-)
G111767 LOC107575789 other downstream 2646028 15752821 ~ 15753235 (-)
G111621 NA other downstream 3645293 14712017 ~ 14753970 (-)
AMCG00006773 tmem243b,tmem243 other upstream 1214378 19623155 ~ 19631895 (-)
AMCG00006774 meig1,LOC107581293,LOC107744135,LOC107592215 other upstream 1224316 19633093 ~ 19635925 (-)
G112420 NA other upstream 1827079 20235856 ~ 20236206 (-)
AMCG00006807 NA other upstream 2238543 20647320 ~ 20653659 (-)
AMCG00006813 NA other upstream 2445280 20854057 ~ 20964562 (-)

Expression


Co-expression Network