Gene
RNA
| Item | Value |
|---|---|
| gene id | G112289 |
| gene name | grm3,LOC108263977,LOC108444204 |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 19541103 ~ 19541968 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| symbol | description |
|---|---|
| grm3 | Predicted to enable group II metabotropic glutamate receptor activity. Predicted to be involved in G protein-coupled glutamate receptor signaling pathway and regulation of glutamatergic synaptic transmission. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in brain and retinal neural layer. Orthologous to human GRM3 (glutamate metabotropic receptor 3). |
| description |
|---|
| PREDICTED: metabotropic glutamate receptor 3-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU140616 | True | 866 | lncRNA | 0.47 | 1 | 19541103 | 19541968 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00006775 | NA | coding | downstream | 133127 | 19403281 ~ 19407976 (-) |
| AMCG00006768 | NA | coding | downstream | 204807 | 19307131 ~ 19336296 (-) |
| AMCG00006767 | NA | coding | downstream | 406376 | 19095536 ~ 19134727 (-) |
| AMCG00006765 | NA | coding | downstream | 495042 | 19006380 ~ 19046061 (-) |
| AMCG00006764 | NA | coding | downstream | 538322 | 19000927 ~ 19002781 (-) |
| AMCG00006776 | NA | coding | upstream | 27766 | 19569734 ~ 19593231 (-) |
| AMCG00006777 | LOC107743993 | coding | upstream | 101650 | 19643618 ~ 19646890 (-) |
| AMCG00006780 | NA | coding | upstream | 137633 | 19679601 ~ 19781353 (-) |
| AMCG00006785 | prpf18 | coding | upstream | 399089 | 19941057 ~ 19947697 (-) |
| AMCG00006790 | cpt1b,LOC100329197,LOC106573415 | coding | upstream | 429659 | 19971627 ~ 19981435 (-) |
| G112288 | LOC108263977,LOC105018424 | non-coding | downstream | 3310 | 19537205 ~ 19537793 (-) |
| G112287 | NA | non-coding | downstream | 26099 | 19514799 ~ 19515004 (-) |
| G112270 | LOC100136012 | non-coding | downstream | 122683 | 19408819 ~ 19418420 (-) |
| G112205 | NA | non-coding | downstream | 655057 | 18883628 ~ 18886046 (-) |
| G112195 | NA | non-coding | downstream | 795886 | 18695072 ~ 18745217 (-) |
| G112290 | grm3,LOC107090533,LOC106924857 | non-coding | upstream | 22988 | 19564956 ~ 19566015 (-) |
| G112292 | NA | non-coding | upstream | 26549 | 19568517 ~ 19569672 (-) |
| G112410 | NA | non-coding | upstream | 536923 | 20078891 ~ 20079411 (-) |
| G112496 | NA | non-coding | upstream | 1172115 | 20714083 ~ 20756786 (-) |
| G112557 | NA | non-coding | upstream | 1455298 | 20997266 ~ 20997529 (-) |
| AMCG00006754 | NA | other | downstream | 1174541 | 18339270 ~ 18366562 (-) |
| G112059 | NA | other | downstream | 1907658 | 17632891 ~ 17633445 (-) |
| AMCG00006719 | NA | other | downstream | 3644234 | 15881130 ~ 15896869 (-) |
| G111767 | LOC107575789 | other | downstream | 3787868 | 15752821 ~ 15753235 (-) |
| G111621 | NA | other | downstream | 4787133 | 14712017 ~ 14753970 (-) |
| AMCG00006773 | tmem243b,tmem243 | other | upstream | 81187 | 19623155 ~ 19631895 (-) |
| AMCG00006774 | meig1,LOC107581293,LOC107744135,LOC107592215 | other | upstream | 91125 | 19633093 ~ 19635925 (-) |
| G112420 | NA | other | upstream | 693888 | 20235856 ~ 20236206 (-) |
| AMCG00006807 | NA | other | upstream | 1105352 | 20647320 ~ 20653659 (-) |
| AMCG00006813 | NA | other | upstream | 1312089 | 20854057 ~ 20964562 (-) |
