AMCG00007848


Basic Information

Item Value
gene id AMCG00007848
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 33502320 ~ 33507381 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007848
GGTGAATGTCTCCTTACGGTGCAGCTGTGCGAAGAAGACCGCTTTGACAAAGAGGATGATGTAGAGTTTTACCTGTTCTTCGCTGGCACCTCTCAGAGACACCTCACCAGCACACAGAGGGTCAACCATGTCACTCTCCATGCCATCTGTCCTGCTCATGACTGCTGCGAGTCTGTCCAGGTCACTCTGTGTTCGGCCAAGCCAGGCTGTCCTGTGGACTCAGTGGCAGAGGACCGCCTCCTGTTTGTGCAGGACCTGGCTTTCGATATGGCCCAGTTCCTGGTGAGCACTGCCGGCAGGACAGATGCCCTGGAGGGCACTAGGATGCTGGATGAATTTCAGATCTCATCAGACGACAGCGAGCAACTGGATGAGAACCTGACACTTGCTCTGAGGCACCTGACGCTGCCTGAGGGGTGGAGCGTGCTGGGCACACATGAGTGCCAGAACAGC

Function

GO:

id name namespace
GO:0016772 transferase activity, transferring phosphorus-containing groups molecular_function
GO:0016773 phosphotransferase activity, alcohol group as acceptor molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function
GO:0016301 kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007848 True 453 mRNA 0.57 2 33502320 33507381

Neighbor

gene id symbol gene type direction distance location
AMCG00007849 NA coding downstream 47884 33426999 ~ 33454436 (-)
AMCG00007844 LOC106560959 coding downstream 287427 33143556 ~ 33214893 (-)
AMCG00007842 NA coding downstream 698163 32528688 ~ 32804157 (-)
AMCG00007843 NA coding downstream 1123416 32378435 ~ 32378904 (-)
AMCG00007836 det1 coding downstream 1705276 31795695 ~ 31797044 (-)
AMCG00007851 NA coding upstream 148900 33656281 ~ 33690820 (-)
AMCG00007850 ap3s2,LOC102235539 coding upstream 213113 33720494 ~ 33738367 (-)
AMCG00007852 ap3s2,LOC101163313,LOC107581850,LOC107372361,LOC107654134 coding upstream 248475 33755856 ~ 33757020 (-)
AMCG00007855 NA coding upstream 282810 33790191 ~ 33797760 (-)
AMCG00007856 NA coding upstream 293189 33800570 ~ 33813933 (-)
G26684 NA non-coding downstream 1084820 32413280 ~ 32417500 (-)
G26646 NA non-coding downstream 1679351 31822742 ~ 31822969 (-)
G26626 NA non-coding downstream 1720429 31781638 ~ 31781891 (-)
G26598 NA non-coding downstream 1815888 31685771 ~ 31686432 (-)
G26416 NA non-coding downstream 2598425 30903669 ~ 30903895 (-)
G26764 NA non-coding upstream 84841 33592222 ~ 33640336 (-)
G26800 NA non-coding upstream 218201 33725582 ~ 33725896 (-)
G26847 NA non-coding upstream 479166 33986547 ~ 33987991 (-)
G26848 NA non-coding upstream 484754 33992135 ~ 33993958 (-)
G26883 mef2a non-coding upstream 682115 34189496 ~ 34223231 (-)
AMCG00007835 LOC107594750 other downstream 1686169 31804899 ~ 31816151 (-)
AMCG00007822 NA other downstream 2159528 31338716 ~ 31342792 (-)
AMCG00007817 NA other downstream 2255671 31192010 ~ 31246649 (-)
AMCG00007768 NA other downstream 4488373 29001049 ~ 29013947 (-)
AMCG00007757 tbc1d2b,LOC107757764,LOC107659498 other downstream 4581197 28894693 ~ 28921123 (-)
G26961 LOC101154678 other upstream 1362054 34869435 ~ 34869807 (-)
AMCG00007883 chrna7,LOC107756517,LOC108274439,LOC106560753,LOC108444230,LOC103033738,LOC107559430,LOC107748270,LOC107679711,LOC107694999 other upstream 2495812 36003193 ~ 36010995 (-)
AMCG00007907 NA other upstream 3335094 36842475 ~ 36846583 (-)
AMCG00007929 NA other upstream 3732703 37240084 ~ 37242983 (-)
G27416 blcap,bc10 other upstream 3987530 37494911 ~ 37499392 (-)

Expression


Co-expression Network