AMCG00007849


Basic Information

Item Value
gene id AMCG00007849
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 33426999 ~ 33454436 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007849
TACAGTCTAGAGGGCCTGTCTGCAGACCAGGGTGATATCGGGAAGGAGTCTCCTTCACAGGGTGCTTCCCCACATGACTCACGCCGCACCCCCTTGCTGGAGAGCAGTGAGAGGGGCTCACTGGTTTCTCTCACAGAGGAGGAACAGGAGTCGGACCTGGGCGAGAACAGCAGTTTGGACAGTCAGAACCCGCTAGTGTCTCTAAACTTAGGCCTGAAGTGGGCAGCGCTGGGACGAAGTCGACCAAAGAGGCGCATCTCCTTCTCCTTCAACATCTCTCCACTTCTCCCAAAATCTAAAACTGTCTTTTCTATTGGCTCTTCATCCAGTGATGAGGAGGAGTCAGACAATATAAGATCATCTTCTATCAGCACTTCCAGCTCATTGGCATACAGCATTAGTGAGGAGGATCGACCCCACAGTCCTGTAAGGAAAGAGCTAGACGGAAAGAGTGGGACGAAGGTTAGCCGCACATTCAGCTACCTCAAGAACAAGATGTACAGCAGCAAGAAGACCAAGGAAAAAGATAAAGACAAGattaaagaaaaagagaaagagaccaaggagaaggagaaagacaAGAAAACCCTGAATGGACACCTTTTCAGTACAGTCAGCTCCAGTTTGCCAGCCCAATGCTACCAATGCAACAAAACTTTCAACGCTAAGGAGGCCAGTCTCTGTGCAAACTGCAATTTACATGTCCACAAGGGCTGTAGAGAAAACCTTCCTGTGTGTGCTAAGGTCAAAATGAagCAGCAAAAGCAGCAATTTGCAGTGCCCGATGCCGTGCCTATGGCAGGTGTCACTTTACGGAATAAAACCACACTCCCGAGGGAGCGTCCGCGGTCTGCCATCTCTATCCTCCCTGACGAAACCAACCTGCTGCTGTACCACCGAAGACACACCAGTATCACACCCTTCAGCAGCAGCAAACTGTCCAAGAGCATCTCCATCAGCAACATCGCAGGCCCTGCATTTGACGAGATGCCATTGAAGATGCAGAGGTACCTGTCCCAGTCCACCGACTCCCTCCACAAGACCAACACGGTTAATGAATCCACCGAGTCCCTGACTGATGAAGGGACTGAGATGATGGACAGCCAGCTAATGGGGGAGTTTGAAATGGATGCCAAGGACCTGGAGGCCGATTCCTGGAGTCTGACTGTTGACAAGAAGCTCGTGAGCCAGCTCAAGAAGGAAATGATCAAACGGCAGGATGTCATCTATGAGCTGATCCAGACCGAGATGCACCATGTGCGGACCCTGAAGATCATGTCAGATGTGTACAGTAAGGGGCTGCAGAAGGAGGTGCAACTGGAGCAACCCATCATAGAGAAGATATTCCCCATGCTGGAAGACCTGCTGGACATTCACACACAGTTCTTCAATCGCATCCTGGAGAGGAAGCGGGAATCGGTcatagaggggaaaaaatgtggTGTCGTCATCCATAAATTAGGAGACATCCTTAACGAGCAGTTTTCGGGCCCCAATGCAGAGCGCATGAAGAAAGTGTATGGAAAATTCTGCAGCCGCCACAGCGAGGCAGTGAATAATTATAAGGAACTGCTCGCCAAAGACAAGCGCTTCCAGGCGTTCATCAAGAAAAAAATGAGCAGCTCAATCGTTAGAAGGCTAGGCATTCCTGAATGTATATTATTAGTAACACAGCGGATAACAAAATACCCTGTGCTCCTGCAGAGGATACTACAGCACACCAAAGACAGTGAGGAGGATCACACTCATCTGAAAAATGCCCTGTGGCAGGTGAAGGAGGTGATCACAGCTGTGGACAGCAAGGTCAACGAGcatgagaagaagaagaggcTAAAGGAGGTCTACAGCCGGACGGACAGCAAGTCCATCATGAGGATGAAGAATGGCCAGATGTTCGCCAGGGAGGACCTGATTCGCAGGAAGCTGCTTCATGATGGTCCGCTGCAGCTCAAGAACTCCGCAGGGAGGCTCAAAGaTGTCCAAGCACTGCTCCTTTCAGACGTCATTGTCTTGCTTCAGGAAAAAgatcaaaaatatgtatttgcttcATTGGACCAGCGCTCCACAGTGATCTCATTGCAGAAGCTGATTGTGCGGGAGATGGCAAATGAGGAGAAGGGCCTCTTCCTGATCACAGCTGGCATCGAGAAACCGGAGATGGTGGAGGTTTACACTAGCTCCAAGGATGAACGCAACACCTGGATGAAACTGATCCAGGATGCTATGCACTCCATTGAGACGGAAGAGGATAAGAAGATCTTGGAGGCAAAAACAAGAGAAATGAGAGAGCAACTGCGGGAGAAGGACAAGCAGATCATGACCCTGCTGAGGGAAAAGGTGAAGCTGTTCAAGGACATGTGTGAGTGTGGTAGGCCGGACGAGACTGCCCTCAGCACAGTGACCCGCGTGCTGTTCAGAGCCAGCACTGAGGACATGCTCAAGGGCGAGCCTCTCTTGAAGGACGCTCTGAAGGAAGTGGAGATGCTGCAGATGTTAGTCAGTGGGAGTCTAGGGGGGGCTATAGGCCAGCAGGTGTCCAGTAATCTGGAAGCGGAGGTTAGTGTCGGGCCTGTGTCACTGCCTCGCCGGGCCGAGACCTTTGGGGGCTTCGACAGTCACCAGATGAACGCTTCAAAAAatGGAGAGAAGGATGAGGGAGAGGAGTCACCAGATCTTCGGAGAACTGAATCAGATGGTGTATTAAAGAAGGGTGGGAATGCCAACCTACTGCTACTGCTGAAAAGAAATAGTGAGGTCCTCCACAGTGTCTCACGTCTTTATGAACTGCTGAGTGCATTGCAGGCAGTGGTGGTGCGGCAAGATGCCTTCATTGAGGACCAGCGGCAGGCGCCGAGTGAGCGGCCCATCTCACGGACCTTCTCGCGGCCCAACTCCCTCATCGAGCAGGAGAAGCAGCGCAGCCTGCAGAAGCATCAGGCAGCCTACGAAGAGGAGAAGAAGCGGTGGGACCGAGAGTGTGAGGCCCGCAAGAAAGAGCTGAATGACAGGGAGGCCCGGCTCAATCAGCTGGACAGCGAGAAACAACAGGGCATCAAGGAGGTGGAGCGTGACAGAGAGGAGCTAAAGGGCAGGAAGGAGGAGTACCAGAGGGACTTGGAGAGGCTGAAAAAAGCCCAGCGCCAGCTTGACAAGGACAGAGAGAATATCTGCAAGGAGCAGGAGAGGATAGACCAGATGAAACAAAAAGATCTAACCAAGTccaaggaaaagaaagagaaaaagaagaagaagaataaaggGCAGCACTCCCAACCTGCAGGTACAGTGGTGTTCACTCTCCCAGACAGC

Function

GO: NA

KEGG:

id description
K16529 ARHGEF13; A-kinase anchor protein 13

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007849 True 3309 mRNA 0.51 25 33426999 33454436

Neighbor

gene id symbol gene type direction distance location
AMCG00007844 LOC106560959 coding downstream 212106 33143556 ~ 33214893 (-)
AMCG00007842 NA coding downstream 622842 32528688 ~ 32804157 (-)
AMCG00007843 NA coding downstream 1048095 32378435 ~ 32378904 (-)
AMCG00007836 det1 coding downstream 1629955 31795695 ~ 31797044 (-)
AMCG00007831 NA coding downstream 1699560 31701336 ~ 31727439 (-)
AMCG00007848 NA coding upstream 47884 33502320 ~ 33507381 (-)
AMCG00007851 NA coding upstream 201845 33656281 ~ 33690820 (-)
AMCG00007850 ap3s2,LOC102235539 coding upstream 266058 33720494 ~ 33738367 (-)
AMCG00007852 ap3s2,LOC101163313,LOC107581850,LOC107372361,LOC107654134 coding upstream 301420 33755856 ~ 33757020 (-)
AMCG00007855 NA coding upstream 335755 33790191 ~ 33797760 (-)
G26684 NA non-coding downstream 1009499 32413280 ~ 32417500 (-)
G26646 NA non-coding downstream 1604030 31822742 ~ 31822969 (-)
G26626 NA non-coding downstream 1645108 31781638 ~ 31781891 (-)
G26598 NA non-coding downstream 1740567 31685771 ~ 31686432 (-)
G26416 NA non-coding downstream 2523104 30903669 ~ 30903895 (-)
G26764 NA non-coding upstream 137786 33592222 ~ 33640336 (-)
G26800 NA non-coding upstream 271146 33725582 ~ 33725896 (-)
G26847 NA non-coding upstream 532111 33986547 ~ 33987991 (-)
G26848 NA non-coding upstream 537699 33992135 ~ 33993958 (-)
G26883 mef2a non-coding upstream 735060 34189496 ~ 34223231 (-)
AMCG00007835 LOC107594750 other downstream 1610848 31804899 ~ 31816151 (-)
AMCG00007822 NA other downstream 2084207 31338716 ~ 31342792 (-)
AMCG00007817 NA other downstream 2180350 31192010 ~ 31246649 (-)
AMCG00007768 NA other downstream 4413052 29001049 ~ 29013947 (-)
AMCG00007757 tbc1d2b,LOC107757764,LOC107659498 other downstream 4505876 28894693 ~ 28921123 (-)
G26961 LOC101154678 other upstream 1414999 34869435 ~ 34869807 (-)
AMCG00007883 chrna7,LOC107756517,LOC108274439,LOC106560753,LOC108444230,LOC103033738,LOC107559430,LOC107748270,LOC107679711,LOC107694999 other upstream 2548757 36003193 ~ 36010995 (-)
AMCG00007907 NA other upstream 3388039 36842475 ~ 36846583 (-)
AMCG00007929 NA other upstream 3785648 37240084 ~ 37242983 (-)
G27416 blcap,bc10 other upstream 4040475 37494911 ~ 37499392 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location