AMCG00009134


Basic Information

Item Value
gene id AMCG00009134
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 26835528 ~ 26839792 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009134
TGACCACACACAAGCTCACACAACACATACAGAGACTCGTACTTTGAGCTGCTGTTACATGCTCCTGTTCAGGACAGTTTGGATATTGAAGTAGTGCTGGGATTAAAAACTTTGGATTACAGAATCCATATTTAGTTTTGAGAATGTGTATTGCTCGCTGTACCCGATGTCTGGGCATTACCTTGGTGCCTCTGGCTGTGGTGTCCATGCTGGCCAACACCCTCCTGTTGTTCCCAGACCTACAGATACAATACCTGTTGGAAGGGCATGTCACCAAGTATGCCATCTGGGTGCCAGGGCTGTGGGCATCGGGCTTCTTGGTTCTTCTAGTTGCCAGGGCATTCATATCAAGTGGCTCTAAGAAAGATTGCTGTGGATTCAGGAGTGAAATGCTGTGTTCTTTCATGTATGTGGCAATAGCCGTGGCGGGTGCCTCCTTCTGTTTTCTGATGAGTGGCACTGGGCTGGCAGAGGGTCCGCTCTGCAAGTTCAACGTCACCCTCAGCAACGGCAACCAGAGCCAGGTGTGGGGCACACCGCTGGAGCTCAAGAACAGCAGAGACAAAAGCTACCTGTTTGATCAGAGCCGCTGGGAGGGGGTCTGTGAGGAGCCGCGGGGCGTGGTGCTGTGGAACATGGTCCTGTTCTCCGTGCTCATGGCCAGCAGTGGCCTGCAGGCTGTAATCTGTGCTGTCCAGGCCATCAACGCTGTGCTTGGACTTGTGTGTGGGCCAGGCTTCCGCAAAAACAAGGTTGGCCCAATGTGACTACAGCCTCCCTGAGCAAAAGAAGCACAAAAACAGCACCTTGAATAGAGAATGCTCCAGACCAGATGGGAGCCAACATTCAGGTCATTCTCTGGCTGTGGGGGCAAGCCTGttcatggttttcttttgttttgtgtatgaaaagcaggtttgtgttttttgagtGCTGGCAAAATGCACTGTGGATACTGATGTGCAATATAGATTCACAGGGCTGGAACCTTCACTGTGGGAGAGGAAGTGCTCAAGTATTTCTATAGGGGGTTCCTAGCTGTGGCCTCACCCCAAGAAATGGGTGCCTGCCACCAAATCTTCACATCATGGCTAATTAAATGACCAGTGATCTCTTTCCTTGTGCATCCTAAACTCTAGTAGCATTCTCACACAGAtggttgattttaaatgcacacagGCTGCTGTTGGCCATAGCCTACACCAGAACAAAGGAAACAACATAGGAAATGATTATAGTTTGGCTTCTGCACTAACCCAGGCTCTGGGGCTACTCTGGCTCCCTCCCACCTCTtacctatttattattttgcattatcaCAATTGGCAGATCCAAATGGAGACAGACAGTTGCAGATTCATGCCAAAACCCAATAATCTCCCAGCCCAGGTTGCTcccattattacatttctttaaacaatCAATTCACCATTCTTACATGTTCAATTCCACTCAAGTATCATGTTAAATTGCCATAATGTATGTTGATGTCTGGTATCATTCCAAGAAATGTGGACATATCCCCTTTCTTAAGAGGTGTTGACTGTCAAATTTACAATGCTGTCAGTCTTTGTTCACAGCATTCAtaacaaaataagcaatttctataaatgtaaataactgttcAGTGTGTAGCTGAATTAATTACTTAAGAACAAATACCCctttcttaaataaatgaacatctTCTTGAGCTAGGATTGTGGTGAAGAGAAGAACTACACCATTCTAAGGGTAAAATGTGATAAAGCAGTGATATGGGTTCTTATAGCAGTTCATTGCATATgtgttttcaaatatgtaaaaaaatggaaactgaagaaaaaaaaagggctGTATACATTTGCTCTTATAACCATGTATACTTCCTTTTTCCAAATGAGCTACCTCCATAATTGATCTTTTCTGCTTTTGTTAATGTGTTAAATACATTGTCAATTAAAACATGTCAATGTCATAGGTGTTTTTCTGAAAGCATGTACAGGTAactgacttaaaaataaaaacatttgtttaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009134 True 2018 mRNA 0.44 6 26835528 26839792

Neighbor

gene id symbol gene type direction distance location
AMCG00009132 NA coding downstream 8514 26823526 ~ 26827014 (-)
AMCG00009136 NA coding downstream 21059 26810895 ~ 26814469 (-)
AMCG00009137 NA coding downstream 45897 26788878 ~ 26789631 (-)
AMCG00009131 NA coding downstream 47063 26787018 ~ 26788465 (-)
AMCG00009127 NA coding downstream 58061 26774549 ~ 26777467 (-)
AMCG00009135 NA coding upstream 12687 26852479 ~ 26860729 (-)
AMCG00009133 NA coding upstream 21466 26861258 ~ 26866165 (-)
AMCG00009142 NA coding upstream 27926 26867718 ~ 26878879 (-)
AMCG00009141 ppp1r7,LOC102778584,LOC106568867 coding upstream 52479 26892271 ~ 26897656 (-)
AMCG00009143 LOC108277812 coding upstream 66738 26906530 ~ 26917479 (-)
G54797 NA non-coding downstream 156940 26678250 ~ 26678588 (-)
G54792 NA non-coding downstream 185535 26626806 ~ 26649993 (-)
G54706 NA non-coding downstream 427664 26407583 ~ 26407864 (-)
G54697 NA non-coding downstream 584671 26250546 ~ 26250857 (-)
G54682 NA non-coding downstream 744743 26090379 ~ 26090785 (-)
G54841 NA non-coding upstream 9421 26849213 ~ 26852408 (-)
G54886 psmd2,LOC107579021 non-coding upstream 138315 26978107 ~ 26979245 (-)
G54911 NA non-coding upstream 186747 27026539 ~ 27033024 (-)
G54914 NA non-coding upstream 193360 27033152 ~ 27034216 (-)
G54978 NA non-coding upstream 581026 27420818 ~ 27422678 (-)
G54821 NA other downstream 38874 26793541 ~ 26796654 (-)
AMCG00009121 NA other downstream 303118 26522633 ~ 26532410 (-)
AMCG00009105 NA other downstream 1303962 25529829 ~ 25531566 (-)
AMCG00009106 NA other downstream 1372838 25460606 ~ 25462690 (-)
AMCG00009100 NA other downstream 1659150 25173677 ~ 25176378 (-)
AMCG00009148 NA other upstream 271204 27110996 ~ 27153475 (-)
AMCG00009151 NA other upstream 474525 27314317 ~ 27335731 (-)
AMCG00009165 rpl35a,LOC106612432 other upstream 773806 27613598 ~ 27618172 (-)
AMCG00009186 LOC101485254,LOC105936810,LOC108230674,LOC100697045,LOC107392689 other upstream 1545291 28385083 ~ 28390096 (-)
AMCG00009215 gpr17 other upstream 2218149 29057941 ~ 29063030 (-)

Expression


Co-expression Network