AMCG00009667


Basic Information

Item Value
gene id AMCG00009667
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 44013726 ~ 44022254 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009667
AAGAGGCCGGATGCTTTTGCAAGGGATGGCTGGCACCCTGTCAAACCTGAGAAGAGGAACTCCCGTCAGCACGCTCACGCAGACAGTTGCGGCTGCTGGTCCCGCGCAGGCCAGTCGCGTCTGGGAGCTGCTTATCAGACGGCACACTGCCTTCCTGTCTCGGGGATGAGAGCCATGCTGCActtgctgctcctgctgctgacCGTGGACCTTCAGAAGCCCCTCAACAATGCCACTGATACAGAAGTGACATGGGGCTACAGCTTCAACATCAGATACTCTAAGGATCCACAGCACCCAGATGGCAACTACTGCTTAAAACTAGTCCATCCCAATGGAATCAGTGAAATCCAAATACTAAAAGACACCAGctccacttttttctttccttctgccAACTATTCCCACCATGGGAATTACAGCTGCCTCTATAATATAACCCTGTTTGATCGTACTTTCACAGAGAGAGagCCCATCTTTAATTTCATCATTGCTGGATCAGCGGGGGGCACTGTGTTCCTGGTTCTCCTGGGGACGGTTATCTGCCTTATCTGTAAAAAGAAGTCGACGAGCAGGAGAGATCCGGTGCAGCTGACCACATACGCAAGCCGGCAGAATGAGGACTCGGACTCTGAGCCCGACTACGTCAACCAGTCACAGCCTGGCAGCTGGCAGGCCGCCCCTGACTACTGTAATGTCAACTTTGTTCCCGAGGAGGTTGAGGAAGACAACTACATTGACACAGAGATGATGACCATCCCCAATGTGTCTAGACAGGTGGGAGACAGTGACAGCGAGCAAGATTACGTGAACAGCGAATTTCTGGGCACAAGCAACAGGGAAAGTGTGTAACATCTACATGGGCAATGAAGTGGATTTCCAGTAGGAACCCTGACTTGTGGCGTGAGGTAGAAATTCGTGGATTGCTACATAAGGCCAAGGCAGCTCTCTGGGCAGGCTCTGCGCCTCTGAGGGTTATCATCCTGACCAGCCCAGCaagataaatgtataaatacagatatacatGTGTGcagaacaaaaacctgtaggCTTCGTAGACACACCTTGAAATGGGTGCTGCTCGCTGCTCCTAACTGCAGAGTTGTCTCTGCTGCCTCTGCAATGCTTTGTGTCTGTTGGATTAGCAGTCAGGATACACCTTCCTCCTGGAAAAAGGAGATGGGATTTCCCCACCTAGAGAAAACCCACCGGAAAACCATGTCCGCTGTTCCAGTGTGTGAACAGCCTCACTGCGCCTCGTCCGTTGACATGTGCTGTTTACACACTGACCGCACACACGCAATGCTGTACTTGTGACATGTCATTGGTTATTTGTAATAAAGACGTGCACATGAAATTGTGCGTGGATGTGCTGTGTTTTATA

Function

GO:

id name namespace
GO:0043604 amide biosynthetic process biological_process
GO:0043043 peptide biosynthetic process biological_process
GO:0006412 translation biological_process
GO:0006518 peptide metabolic process biological_process

KEGG:

id description
ko03010 Ribosome

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009667 True 1384 mRNA 0.51 4 44013726 44022254

Neighbor

gene id symbol gene type direction distance location
AMCG00009668 NA coding upstream 426 44006914 ~ 44013300 (+)
AMCG00009670 NA coding upstream 21676 43978592 ~ 43992050 (+)
AMCG00009661 NA coding upstream 62097 43940293 ~ 43951629 (+)
AMCG00009660 NA coding upstream 110961 43897866 ~ 43902765 (+)
AMCG00009662 NA coding upstream 123255 43880029 ~ 43890471 (+)
AMCG00009669 NA coding downstream 3290 44025544 ~ 44051535 (+)
AMCG00009676 NA coding downstream 69286 44091540 ~ 44099575 (+)
AMCG00009675 NA coding downstream 81542 44103796 ~ 44112657 (+)
AMCG00009674 NA coding downstream 91157 44113411 ~ 44122931 (+)
AMCG00009673 NA coding downstream 106029 44128283 ~ 44142154 (+)
G58319 NA non-coding upstream 87095 43921474 ~ 43926631 (+)
G58317 NA non-coding upstream 97966 43909588 ~ 43915760 (+)
G58304 NA non-coding upstream 138003 43873781 ~ 43875723 (+)
G58291 NA non-coding upstream 332773 43678351 ~ 43680953 (+)
G58214 dedd,LOC108411641,LOC107758014,LOC107699191,LOC107603111 non-coding upstream 689147 43318916 ~ 43324579 (+)
G58467 NA non-coding downstream 147231 44169485 ~ 44169789 (+)
G58510 NA non-coding downstream 302897 44325151 ~ 44325573 (+)
G58513 NA non-coding downstream 306017 44328271 ~ 44360062 (+)
G58527 NA non-coding downstream 391018 44413272 ~ 44483247 (+)
G58666 NA non-coding downstream 870591 44892845 ~ 44893078 (+)
G58324 NA other upstream 77964 43932952 ~ 43935762 (+)
AMCG00009647 NA other upstream 569306 43436990 ~ 43444420 (+)
G57830 NA other upstream 1935485 42036018 ~ 42078241 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other upstream 2414602 41596229 ~ 41599124 (+)
G57604 NA other upstream 3019067 40990802 ~ 40994659 (+)
G58522 NA other downstream 364243 44386497 ~ 44407568 (+)
AMCG00009694 LOC103385381 other downstream 539523 44561777 ~ 44570531 (+)
AMCG00009700 plxna3,LOC102792317,LOC102288896,LOC101485239,LOC106572068,LOC106566493 other downstream 562308 44584562 ~ 44603609 (+)
G58600 plxna3,LOC107734520,LOC107584894,LOC107674285,LOC107743094 other downstream 610496 44632750 ~ 44651967 (+)
AMCG00009706 pim1 other downstream 727922 44750176 ~ 44760058 (+)

Expression


Co-expression Network