AMCG00009677


Basic Information

Item Value
gene id AMCG00009677
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 44051410 ~ 44064467 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009677
ATGGTTTTTGACGCTATGCCTGAAACCTCCACGGCCACTGTGAAAGCTTCAATAGGAAGCGGCCCCTTCGGATTTCATGTCCTGGTGCAAGATCATTTCCGGATCAGACTGGTCAATGGGAATGATCAATGCTCTGGGAGAGTGGAGGTCTATCACAGTGGCCAGTGGGGGACAGTGTGTGATGACAGCTGGGACCTGAAGGATGCTGCAGTGGTGTGTCGACAGCTGGGGTGTGGGAGTGCAGTGTCTGCCCCAGCCAGTGCCACATTTGGACAGGGGAGTGAGCCCACTTGGCTGGATGATGTGGAGTGTTCAGATACTGAGGGCTGCCTTACTTTTTGTAAACACAGAGGATTTGGAAAAGAAGACTGCAGTCACAGTGAAGATGCTGGAGTTGTGTGTTCCGATGCCATGAGGAAGCCTTCTCTCTCCTTGGTCACGTCATATTCTGTATTTGCACCTGGAGAGACAGTCTGTTTCCGCTGCACTGCTCGCTCCCCCCTCTACACCAGCATTGACTTTGACCTGTACCAGGACATGGCCAGAAACCCCACTGTGACCCAGAAGTCTGGATCTTCACAGATTCAAGTGGAGCTGAATGTGTCTAAAGTGGAGCCGTCACACCAGGGCAGCTACAGCTGTCGGTACAGAGTCCAGGGAAGCTCGGGGACCAAGCAGCTCAGCTCGCAGCGACTCTGTTCAGATTTCCATTGTGCTCGTACTGGAGAGGTTGCCTGGGGGGACAGTGTTGGCATCACCTGCTTCATCTCCACGACCACCTTCACCTTTCCTGCACTGGACTTTGTCCACAAGGGCGATTACCACTGTCACTATCAGACACAAGTGTCCAGTCGCACTTTCAGCTACCCAGAGAGCGATTCTCAGCCCAACATCTCCCTCAGCCTCCCTGCTGCAGAAGTGACCAGGGGCACCAGTTTCAGCATCACCTGCTCCACAGAGCCACAGTACGCAGGTGGCACCTTTCACCTGATGAGGATTGAGCCGAATGGAACCACCATCCAGTCAACACCAGCTGTCAATCACTCCGCCACCTTCTCCTTTCCTGCTGCCGAGTATTCCCACCAGGGGAATTACAGCTGCCGCTACGACACAAGAGTGTCCACTCGTAACTTCTCCTCTCCTGAAAGTGATGTGCTGGTCATCACAATGAGAGTCGTGTCCGGGGTGACCTCGGTGCTGTTGGTGGTGGTGACACTCCTTGTCATCATCCTTGTGATGTgtaagaaaaggaagaaagccACAAAActgaagagagagagcataATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009677 True 1287 mRNA 0.53 8 44051410 44064467

Neighbor

gene id symbol gene type direction distance location
AMCG00009671 NA coding downstream 44607 43996712 ~ 44006803 (-)
AMCG00009664 NA coding downstream 115652 43933227 ~ 43935758 (-)
AMCG00009666 LOC105890655,LOC108438067,LOC106566835,LOC106572042,LOC105026930,LOC107558917 coding downstream 120692 43924421 ~ 43930718 (-)
AMCG00009663 NA coding downstream 132640 43902295 ~ 43918770 (-)
AMCG00009665 NA coding downstream 155752 43892450 ~ 43895658 (-)
AMCG00009678 NA coding upstream 9383 44073850 ~ 44074116 (-)
AMCG00009683 NA coding upstream 191948 44256415 ~ 44264122 (-)
AMCG00009690 gdi1,LOC105013583,LOC106567106,LOC106572620 coding upstream 220411 44284878 ~ 44293118 (-)
AMCG00009693 NA coding upstream 259518 44323985 ~ 44328354 (-)
AMCG00009692 NA coding upstream 274596 44339063 ~ 44342291 (-)
G58395 NA non-coding downstream 73924 43977285 ~ 43977486 (-)
G58394 NA non-coding downstream 78780 43972264 ~ 43972630 (-)
G58391 NA non-coding downstream 103888 43938921 ~ 43947522 (-)
G58377 NA non-coding downstream 175671 43873781 ~ 43875739 (-)
G58374 NA non-coding downstream 180293 43870354 ~ 43871117 (-)
G58452 NA non-coding upstream 32809 44097276 ~ 44104710 (-)
G58456 NA non-coding upstream 44869 44109336 ~ 44109715 (-)
G58457 NA non-coding upstream 45502 44109969 ~ 44110283 (-)
G58459 NA non-coding upstream 51183 44115650 ~ 44121067 (-)
G58511 NA non-coding upstream 260690 44325157 ~ 44325573 (-)
AMCG00009672 NA other downstream 55756 43989511 ~ 43995654 (-)
G58333 NA other downstream 106113 43482421 ~ 43945297 (-)
G58025 NA other downstream 1377703 42648850 ~ 42673707 (-)
AMCG00009582 NA other downstream 1995282 42041199 ~ 42056128 (-)
AMCG00009571 LOC107087052,LOC105890629 other downstream 2224476 41814559 ~ 41826934 (-)
AMCG00009697 NA other upstream 437320 44501787 ~ 44512249 (-)
G58584 NA other upstream 477427 44541894 ~ 44542809 (-)
G58589 NA other upstream 501602 44566069 ~ 44566834 (-)
G58653 NA other upstream 718451 44782918 ~ 44785134 (-)
AMCG00009739 NA other upstream 1104474 45168941 ~ 45230457 (-)

Expression


Co-expression Network