AMCG00009720


Basic Information

Item Value
gene id AMCG00009720
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 44989273 ~ 44998008 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009720
ATGAAGCTCAATGGGGAGGACGACGCTCTGGGCCCCTACAGGACCCTGCAGGACCGGAGCCGCATCCAGCTGCTAGGCCATGTTTGTGAGGGGCGGTGTGAGGGGCAGTGTGCGGACAGGAAGCTCCCTCAGCATGCACTCCCTGCTGCAGTCCTACAGCTCCGCCCTGCGCCGGCCGCACCACCTGGGTCGCAGCCTCAGCTCCTACCTGAACCGCAACACACGCCTGGCCCTGTCCGGGTACGACTGAGAAACAACCCGGCACGCAAGATCTCCACTGAGGACATCAATAAGCGTCTGTCTCTGCCGGCTGATATCAGGCTGCCCGATGGCTACCTGGAGAAGTTCTCCCTCAACAGTCCTCCATTCGACAAGCCGCTGAGCCGCCGGCTACGGAGAGTCTCCCTGtctGAGATTGGCTTTGGGAAGCTGGAGACCTATGTCAAGCTGGACAAACTGGGAGAGGGGACCTACGCCACGGTGTACAAGGGCCGCAGCAAACTGACAGACAACCTGGTGGCCCTGAAGGAGATCAGGCTGGAGCACGAGGAGGGTGCGCCCTGCACCGCCATcagggaggTGTCCCTCCTGAAGGACCTGAAGCACGCCAACATCGTCACTCTGCACGACATCATCCACACCCAGAAATCCCTGACACTGGTCTTCGAGTACCTGgacaaGGATCTGAAGCAGTACTTGGATGACTGTGGGAACTGCATCGCCATGCACAATGTGAAGGTGGTGACTCTATGGTACCGTCCCCCAGACATCCTGCTGGGCTCCACAGACTACTCCACCCAGATAGACATGTGGGGTGTGGGCTGTATCTTCTATGAGATGTCCACGGGCCGCCCTCTGTTCCCAGGGTCCACTGTGGAGGAGGAGCTGCACTTCATCTTCAAACTGCTCGgctGGACAATGATGGTGTGCAGCTGCTCTCCAAACTCCTACAGGAAGCGCATCTCGGCGGACGAGGCCATGAGGCAGCCGTACTTCCACAGCCTGGGGGCGAGGGTGGTCCGGCTCCCCgacactacTTCTATATTTGCACTAAAGGAGATCCAGCTGGAGAAGGAAGCGGCGGTGCGGACGAGCTCTCTGCCAGAGTCAGCCCTGAAAGTGTGTGTGGAGGACGCGGAGTTCTGACCCAGTCAGTAGCAAATCAAGAAGACAGAGCCTGCTTCTCTGAGAGTGAGAGACGTGCCCAGAAGGGAAAccggagagggagggagggaggcagggggcGTGGCGTTGTATTATCAATGGGACTCATATTTAACTTgttcagtttttacattttttggggggggggtttgtttCCCAGAGAGGGGCCTTTCGTCTTT

Function

GO:

id name namespace
GO:0016301 kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009720 True 1343 mRNA 0.58 15 44989273 44998008

Neighbor

gene id symbol gene type direction distance location
AMCG00009722 NA coding upstream 4436 44975660 ~ 44984837 (+)
AMCG00009719 NA coding upstream 20194 44966879 ~ 44969079 (+)
AMCG00009716 elk1,LOC103384389,LOC102208123,LOC100703163 coding upstream 26989 44950673 ~ 44962284 (+)
AMCG00009715 NA coding upstream 55459 44927867 ~ 44933814 (+)
AMCG00009714 usp11 coding upstream 72430 44901426 ~ 44916843 (+)
AMCG00009726 NA coding downstream 3130 45001138 ~ 45003572 (+)
AMCG00009721 NA coding downstream 7161 45005169 ~ 45031780 (+)
AMCG00009730 magix,LOC101063258,LOC108228699 coding downstream 91195 45089203 ~ 45093238 (+)
AMCG00009728 NA coding downstream 107528 45105536 ~ 45111832 (+)
AMCG00009727 NA coding downstream 117655 45115663 ~ 45119186 (+)
G58668 NA non-coding upstream 65573 44922084 ~ 44923700 (+)
G58660 NA non-coding upstream 67636 44918043 ~ 44921637 (+)
G58666 NA non-coding upstream 96195 44892845 ~ 44893078 (+)
G58527 NA non-coding upstream 506026 44413272 ~ 44483247 (+)
G58513 NA non-coding upstream 629211 44328271 ~ 44360062 (+)
G58776 NA non-coding downstream 145167 45143175 ~ 45143472 (+)
G58792 NA non-coding downstream 196515 45194523 ~ 45198264 (+)
G58825 NA non-coding downstream 268931 45266939 ~ 45275033 (+)
G58830 NA non-coding downstream 278480 45276488 ~ 45277596 (+)
G58822 NA non-coding downstream 331776 45329784 ~ 45332856 (+)
AMCG00009706 pim1 other upstream 229215 44750176 ~ 44760058 (+)
G58600 plxna3,LOC107734520,LOC107584894,LOC107674285,LOC107743094 other upstream 337306 44632750 ~ 44651967 (+)
AMCG00009700 plxna3,LOC102792317,LOC102288896,LOC101485239,LOC106572068,LOC106566493 other upstream 385664 44584562 ~ 44603609 (+)
AMCG00009694 LOC103385381 other upstream 418742 44561777 ~ 44570531 (+)
G58522 NA other upstream 581705 44386497 ~ 44407568 (+)
G58747 NA other downstream 58057 45056065 ~ 45057874 (+)
AMCG00009761 NA other downstream 509759 45507767 ~ 45511037 (+)
AMCG00009759 NA other downstream 561969 45559977 ~ 45572255 (+)
AMCG00009760 NA other downstream 575262 45573270 ~ 45575964 (+)
AMCG00009758 abcd1,LOC107701814,LOC107743108,LOC108440542,LOC107674359,LOC107552221,LOC107727428 other downstream 578531 45576539 ~ 45584727 (+)

Expression


Co-expression Network