Gene
RNA
| Item | Value |
|---|---|
| gene id | G49606 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 2909662 ~ 2910628 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU62048 | True | 967 | lncRNA | 0.50 | 1 | 2909662 | 2910628 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00008506 | smarca4 | coding | downstream | 6467 | 2886767 ~ 2903195 (-) |
| AMCG00008502 | NA | coding | downstream | 37611 | 2854383 ~ 2872051 (-) |
| AMCG00008504 | ap1m2 | coding | downstream | 63771 | 2839095 ~ 2845891 (-) |
| AMCG00008500 | NA | coding | downstream | 74346 | 2832719 ~ 2835316 (-) |
| AMCG00008501 | NA | coding | downstream | 77490 | 2824461 ~ 2832172 (-) |
| AMCG00008507 | NA | coding | upstream | 349 | 2910977 ~ 2913789 (-) |
| AMCG00008508 | LOC107751642,LOC105909359 | coding | upstream | 12257 | 2922885 ~ 2950000 (-) |
| AMCG00008512 | NA | coding | upstream | 101229 | 3011857 ~ 3014067 (-) |
| AMCG00008513 | NA | coding | upstream | 111115 | 3021743 ~ 3023525 (-) |
| AMCG00008511 | LOC103364966 | coding | upstream | 118041 | 3028669 ~ 3029688 (-) |
| G49547 | NA | non-coding | downstream | 85686 | 2823241 ~ 2823976 (-) |
| G49462 | NA | non-coding | downstream | 472905 | 2377005 ~ 2436757 (-) |
| G49419 | NA | non-coding | downstream | 549550 | 2359860 ~ 2360112 (-) |
| G49414 | NA | non-coding | downstream | 672801 | 2236527 ~ 2236861 (-) |
| G49393 | NA | non-coding | downstream | 834014 | 2068083 ~ 2075648 (-) |
| G49614 | NA | non-coding | upstream | 64321 | 2974949 ~ 2975153 (-) |
| G49802 | NA | non-coding | upstream | 462916 | 3373544 ~ 3379324 (-) |
| G49806 | NA | non-coding | upstream | 479575 | 3390203 ~ 3392090 (-) |
| G49811 | NA | non-coding | upstream | 503553 | 3414181 ~ 3443909 (-) |
| G49810 | NA | non-coding | upstream | 515154 | 3425782 ~ 3437347 (-) |
| G49605 | NA | other | downstream | 997 | 2906675 ~ 2908665 (-) |
| AMCG00008491 | prkcsh,LOC102779661 | other | downstream | 207240 | 2636915 ~ 2702422 (-) |
| AMCG00008474 | NA | other | downstream | 824637 | 2073783 ~ 2085025 (-) |
| G49375 | NA | other | downstream | 1028700 | 1879621 ~ 1880962 (-) |
| AMCG00008462 | NA | other | downstream | 1050171 | 1798845 ~ 1859491 (-) |
| AMCG00008554 | NA | other | upstream | 520186 | 3430814 ~ 3871269 (-) |
| AMCG00008547 | elof1,LOC103393660,LOC100703874,LOC106589640,LOC106935058 | other | upstream | 859056 | 3769684 ~ 3777354 (-) |
| AMCG00008602 | NA | other | upstream | 2676447 | 5587075 ~ 5610329 (-) |
| AMCG00008609 | NA | other | upstream | 2745061 | 5655689 ~ 5786328 (-) |
| G50267 | LOC107575789 | other | upstream | 2838262 | 5748890 ~ 5885450 (-) |
