G52044


Basic Information

Item Value
gene id G52044
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 13476750 ~ 13476978 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU65130
gtttactctgtgtttattgtgtttactctgtgtttactctgtgtttattgtgtttactctgtgtttattgtgtttactctgtgtttactctgtgtttattgtgtgtttattgtgtttactctgtgtttaccctgtatttattgtgtttactctgtgtttactgtgtgtttattgtgtttactctgtgtttactctgtgtttattgtgtttactctgtgtttactctgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65130 True 229 lncRNA 0.32 1 13476750 13476978

Neighbor

gene id symbol gene type direction distance location
AMCG00008863 prkag1 coding upstream 37125 13434457 ~ 13439625 (+)
AMCG00008862 kmt2d,LOC107563643 coding upstream 45509 13387407 ~ 13431241 (+)
AMCG00008854 rhebl1,LOC105901881,LOC103035598,LOC108435697 coding upstream 99048 13368598 ~ 13377702 (+)
AMCG00008855 NA coding upstream 110645 13355405 ~ 13366105 (+)
AMCG00008857 LOC102783756 coding upstream 129388 13333765 ~ 13347362 (+)
AMCG00008867 NA coding downstream 40685 13517663 ~ 13534601 (+)
AMCG00008868 LOC106567041,LOC103368469,LOC105013543,LOC100705688 coding downstream 95548 13572526 ~ 13582004 (+)
AMCG00008871 NA coding downstream 140073 13617051 ~ 13628477 (+)
AMCG00008870 NA coding downstream 152195 13629173 ~ 13638246 (+)
AMCG00008875 NA coding downstream 207590 13684568 ~ 13685905 (+)
G51970 NA non-coding upstream 161698 13313590 ~ 13315052 (+)
G51969 NA non-coding upstream 164292 13311329 ~ 13312458 (+)
G51968 NA non-coding upstream 165977 13309616 ~ 13310773 (+)
G51904 NA non-coding upstream 289611 13140563 ~ 13187139 (+)
G51828 NA non-coding upstream 495975 12978864 ~ 12980775 (+)
G52100 NA non-coding downstream 209861 13686839 ~ 13687780 (+)
G52234 NA non-coding downstream 651509 14128487 ~ 14128691 (+)
G52361 NA non-coding downstream 1065661 14542639 ~ 14545754 (+)
G52364 NA non-coding downstream 1075918 14552896 ~ 14553241 (+)
G52372 NA non-coding downstream 1083741 14560719 ~ 14561249 (+)
AMCG00008856 rps26,RPS26,LOC106567051 other upstream 167320 13306495 ~ 13309430 (+)
G51939 NA other upstream 219110 13253814 ~ 13257640 (+)
G51928 LOC108272117,LOC107678215,LOC107581315,LOC107713111,LOC107551923 other upstream 251804 13222320 ~ 13224946 (+)
AMCG00008837 march9,LOC107664138,LOC107593952,LOC107714987,LOC106583285 other upstream 484025 12980804 ~ 12992725 (+)
G51812 NA other upstream 549956 12925238 ~ 12926794 (+)
G52349 NA other downstream 1004943 14481921 ~ 14483255 (+)
AMCG00008910 NA other downstream 1050840 14527818 ~ 14542248 (+)
AMCG00008917 smarcc2 other downstream 1261471 14738449 ~ 14754644 (+)
AMCG00008920 NA other downstream 1306065 14783043 ~ 14795184 (+)
AMCG00008919 zbtb45,LOC104952775,LOC105021497,LOC101077905,LOC102207372,LOC101487628,LOC102796714,LOC100704009 other downstream 1330319 14807297 ~ 14811757 (+)

Expression


Co-expression Network