G51928 (LOC108272117,LOC107678215,LOC107581315,LOC107713111,LOC107551923)


Basic Information

Item Value
gene id G51928
gene name LOC108272117,LOC107678215,LOC107581315,LOC107713111,LOC107551923
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 13222320 ~ 13224946 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU64968
ATTTTGATCAGGTCGCCCTCCTTCAGGGTGTAGTCTGGGTCGCTCTTCAGGGGGGAGAAGTGGCACACGCAGTTATTGACCGAGACGCTGGTGGGGAAGGCGATCCCTttcttcatctccttctccttcttgaAGATCTTGCCAGTTTCCTGCATGATGAGGGAGTCCCCCTTTTCACACAGAGCCAGCACTGACACGCCGGGCTGGGCCGCCTCCACCACCTTGCGCACAGCCTGGTTGGCGATGTCGCCCCCCATTTTGTACTTGGTGACCACCAGGTCCTCGGCGATGGTCTGCTCTTGCTGCTCGTCGTCTCCCGACATCTTTATCTCGGCGGCTCTCTGGCACTTCTGTCCCCGGGGTGTCGGCGGCGagctcagtcagtcagtcaggctcGATCCCGTGGCTCCGGCCCGGCCTCCACGACCCGCCCCCCGCGCACATACGCGCCGCACGTCACAGGCCAGGGCCCCGG

Function

NR:

description
PREDICTED: proliferation-associated protein 2G4-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64968 True 475 TUCP 0.63 3 13222320 13224946

Neighbor

gene id symbol gene type direction distance location
AMCG00008842 NA coding upstream 89645 13123231 ~ 13132675 (+)
AMCG00008841 ctdsp2,LOC106583267,LOC106572594,LOC105013607 coding upstream 105276 13105526 ~ 13117044 (+)
AMCG00008840 NA coding upstream 124405 13074080 ~ 13097915 (+)
AMCG00008835 NA coding upstream 157239 13063495 ~ 13065081 (+)
AMCG00008838 NA coding upstream 208187 13005602 ~ 13014133 (+)
AMCG00008847 wnt1,LOC106567052,LOC106572674 coding downstream 56328 13281274 ~ 13288925 (+)
AMCG00008858 NA coding downstream 74360 13299306 ~ 13302628 (+)
AMCG00008857 LOC102783756 coding downstream 108819 13333765 ~ 13347362 (+)
AMCG00008855 NA coding downstream 130459 13355405 ~ 13366105 (+)
AMCG00008854 rhebl1,LOC105901881,LOC103035598,LOC108435697 coding downstream 143652 13368598 ~ 13377702 (+)
G51904 NA non-coding upstream 35181 13140563 ~ 13187139 (+)
G51828 NA non-coding upstream 241545 12978864 ~ 12980775 (+)
G51814 LOC106567079 non-coding upstream 294475 12927618 ~ 12927845 (+)
G51796 NA non-coding upstream 325213 12896349 ~ 12897107 (+)
G51736 NA non-coding upstream 476554 12739197 ~ 12745766 (+)
G51968 NA non-coding downstream 84670 13309616 ~ 13310773 (+)
G51969 NA non-coding downstream 86383 13311329 ~ 13312458 (+)
G51970 NA non-coding downstream 88644 13313590 ~ 13315052 (+)
G52044 NA non-coding downstream 251804 13476750 ~ 13476978 (+)
G52100 NA non-coding downstream 461893 13686839 ~ 13687780 (+)
AMCG00008837 march9,LOC107664138,LOC107593952,LOC107714987,LOC106583285 other upstream 229595 12980804 ~ 12992725 (+)
G51812 NA other upstream 295526 12925238 ~ 12926794 (+)
G51756 NA other upstream 376087 12842715 ~ 12846233 (+)
G51734 NA other upstream 505534 12715494 ~ 12716786 (+)
AMCG00008810 NA other upstream 672702 12539598 ~ 12549618 (+)
G51939 NA other downstream 28868 13253814 ~ 13257640 (+)
AMCG00008856 rps26,RPS26,LOC106567051 other downstream 81549 13306495 ~ 13309430 (+)
G52349 NA other downstream 1256975 14481921 ~ 14483255 (+)
AMCG00008910 NA other downstream 1302872 14527818 ~ 14542248 (+)
AMCG00008917 smarcc2 other downstream 1513503 14738449 ~ 14754644 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_031830 pa2g4a coding NC_007117.7 CM002890.2 7533601 ~ 7551140 (+)