AMCG00010950


Basic Information

Item Value
gene id AMCG00010950
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 5415532 ~ 5431128 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010950
ATGCGGCGACGGCTGACGAAGCAGGCAGGTAGGGAACAGATGTGGGGTTTGCGGAAGGCGGCCGTTCCCGGACGGGCCGCAGTCACAGCCGAGGTGCGACAGGGGCGGCTGCGGCCGTGGAGGCTGCCTCCACGAGGAGACGGGCGCGGCGCTGTACGCGGGCCGAGCCTCTGCCTTCTGCATGGGAATGAGGCAGCTTTAGGAGGAGTTGGTCTGCAGGACTCCATCTTGCTGACTGCAGCAGTTACCGTGGCAAGGGGAGGtgatgggggtgggggcttTGGGAGAAAAGGGGTGAGGTGGGGGGGCGCGGCGGTGGTGGTGGTTTTCGGGGACGGGATACATGCAGTGAACGGCAACCCCACGGTGGAGCCCTTCCCTGCAGGAATGGAGCTGGCCATGTTCGGTTTGGGCTGTTTCTGGGGGGCCGAACGCAGATTCTGGAGAATGCAGGGGGTCTTCTCCACACACGTAGGATATGCTGGAGGTGTGACACCCAACCCCAACTATGAAGAAATGCGTACAGGGCTGACGGGCCACACGGAGGTGGTGCGAGTGGTGTACGACCCCCAGGCTCTCAGCTTCGAGGAGCTCCTCAAAGTCTTCTGGGAGAGCCACGACCCCACACAAGCTGCACGGAGCGGCTCCGTCTCGGTTGTTAAAATATGCAGGATCCACAGGGCCGGCTGCTGTGTCCGTCTGCAGGCTGCGGCAGCACAGACATGA

Function

GO: NA

KEGG:

id description
K07304 msrA; peptide-methionine (S)-S-oxide reductase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010950 True 726 mRNA 0.63 7 5415532 5431128

Neighbor

gene id symbol gene type direction distance location
AMCG00010949 NA coding downstream 4737 5400289 ~ 5410795 (-)
AMCG00010948 NA coding downstream 32403 5373859 ~ 5383129 (-)
AMCG00010945 id3 coding downstream 59970 5353943 ~ 5355562 (-)
AMCG00010947 NA coding downstream 68165 5335846 ~ 5347367 (-)
AMCG00010944 NA coding downstream 211901 5175899 ~ 5203631 (-)
AMCG00010953 ythdf2,LOC107654833,LOC107697702,LOC107721611 coding upstream 35205 5466333 ~ 5478561 (-)
AMCG00010952 NA coding upstream 51208 5482336 ~ 5489882 (-)
AMCG00010955 qki,LOC107721620,LOC107697705,LOC107590898,LOC106922399 coding upstream 189167 5620295 ~ 5625529 (-)
AMCG00010954 qkia,LOC107697705,LOC107721620,LOC107590898,LOC107711937,LOC105908305 coding upstream 213148 5644276 ~ 5653028 (-)
AMCG00010958 NA coding upstream 223891 5655019 ~ 5673677 (-)
G103329 NA non-coding downstream 37306 5359975 ~ 5378226 (-)
G103309 NA non-coding downstream 81275 5331732 ~ 5334257 (-)
G103149 NA non-coding downstream 989960 4425354 ~ 4425572 (-)
G103095 NA non-coding downstream 1262784 4152518 ~ 4152748 (-)
G103094 NA non-coding downstream 1264615 4150499 ~ 4150917 (-)
G103362 NA non-coding upstream 127549 5558677 ~ 5615853 (-)
G103473 NA non-coding upstream 953353 6384481 ~ 6386604 (-)
G103503 NA non-coding upstream 1082735 6513863 ~ 6514123 (-)
G103539 NA non-coding upstream 1192953 6624081 ~ 6627452 (-)
G103556 NA non-coding upstream 1324165 6755293 ~ 6762139 (-)
AMCG00010946 NA other downstream 90108 5284330 ~ 5325424 (-)
AMCG00010939 NA other downstream 275023 5134053 ~ 5140509 (-)
AMCG00010937 NA other downstream 286391 5115715 ~ 5129141 (-)
AMCG00010925 srsf10,LOC108426370,LOC101486875 other downstream 765126 4642652 ~ 4650406 (-)
G103112 NA other downstream 1229558 4169793 ~ 4185974 (-)
G103395 NA other upstream 273642 5704770 ~ 5748564 (-)
AMCG00010966 NA other upstream 534005 5965133 ~ 5974307 (-)
AMCG00010988 NA other upstream 1197442 6628570 ~ 6644723 (-)
G103832 NA other upstream 2507009 7938137 ~ 8027031 (-)
AMCG00011051 NA other upstream 3388423 8819551 ~ 8864051 (-)

Expression


Co-expression Network