AMCG00011117 (ak2,LOC106570014)


Basic Information

Item Value
gene id AMCG00011117
gene name ak2,LOC106570014
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 11855231 ~ 11860000 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011117
ATGCCCCCCAGCAGCCAGCTCGACGAGAAGGTGGCGGAAGTAAGAAAGGGCATCCGGGCCATTCTGCTGGGACCCCCCGGAGCCGGGAAAGGGACTCAGGCTCCTCGGCTGGCCCagcagtactgtgtgtgtcaccTCGCCACAGGAGACATGCTGAGGGCGATGGTGGCCTCGGGATCGGAGCTAGGTGCCAGGCTCAAACACACCATGGACTCTGGCAAACTGGTCAGTGATGAGATGGTGGTGGAACTCATTGAGAAGAACTTGGACACGCCCCCTTGTAAGAATGGCTTCCTTCTGGATGGTTTCCCTCGCACAGTGAAGCAGGCAGAGATGCTGGACGACCTGCTGGAGCGACGCTTGGAGAAGCTGGACTCTGTGATCGAGTTCGCTGTTGATGACTCGCTGCTGGTGCGCCGGATCTGCGGCAGACTGATCCATCAGCCCAGTGGGCGCTCCTACCATGAGGAATTCAACCCCCCCAAGGAGCACATGAAGGACgatGTGACAGGCGAGCCTCTCTCTCGGCGCTCTGATGACAATGAAAACACACTACGCTCCCGCCTGGCTGCCTACCACACCCAGACCACGCCGCTGGTGCAATACTATAGTGCCCGTGGGCTGCACCATGCTGTGGATGCCAGCCTGACCCCCGACCTAGTCTACGCCAGCATCCTCGCCGCCTTCTCCCGTGCCACCTGTAAAGACACCGTCCTCTTTGTCTAGACCACTCACTTGCTCGctcgcttgctctctctctggtcttACTCTCTTGTCATCTTtcagtgcatctctctctctgcgttgTTGTCTCTCAATGTCTTTCTCTTATATTTCTGTCTGGCAGTGTGCGGGGCAGCTGATGTGCCCCCTGTGTGCAGGCTCTCTCCCAGTGCCTGTGACACCATCTCTGCACCTGTTCTCCTGGTCTGGGGGGGTCTGGGGTCTGGACTGGATTGTTCTGGTTTGGTTCAGGCCTGGCTTTCAGAATTAGTGAATCTGTGAATTAGTTAGTTAACAAGATGATTGCTGCGGCGTCCTGACCATGCTCAGGTGTATTAGTGCTGCTGTGTGCAGTGTCACACCCCACAGACACTCAGGGACTCCAGGGCAGTTCTGTCCTGTTTTTACTGTCAGCCCTGGCCCTTGTGAGCTACAGTACAATATCCGTTGGACTGAGGGGAGTAGGGTTGGACTTTTCTGTGTTAGACAAGCTGTACATTTTTATGTCTGAACATGGCCAAAGCCATTCAGTACACAGCAATCCactatttaataaaattaatgaatgaatacatcttTATGTATGCACTTGTACAGCTGCAGGGTTTAGACGGTCCGGATCAGTCTGCCCTTCGGGCTGCCTCCCCAGATCTCTCAGTGCAGCGCTGCCAAAATGAGTCAGTGTTGAACTtgtgcagcagctgcagggtTGTGGTTGCAGGAGGGTGCGTAGTGTGAAGTAAAGCTTGTGTTCGTTCTGACCAGTGCACTCCGAGGCACCCACACTGGGCTGTAAGCGGTTTCTGTGTTTGCAGTACTGCCCAGCCGCCACTTAAGGGTGCTTGTCTCTGTTTCCCAGCTCTGATTCTCTCCTGTCTGCAGAATGGCCTCAAGTTGTGAACTAACCTCAGTGTGTGTGActtatatttatctttttataaaCTGTCTGGAGGGGTAGAAAGATGGAGGGATGTGGTGGAAGGAGGGGATGGGAGACGCAGATGTAAACCaac

Function

symbol description
ak2 Predicted to enable adenylate kinase activity. Acts upstream of or within hematopoietic stem cell differentiation and leukocyte differentiation. Predicted to be located in mitochondrial intermembrane space. Predicted to be active in mitochondrion. Is expressed in head; hematopoietic system; intermediate cell mass of mesoderm; and otic vesicle. Used to study reticular dysgenesis. Human ortholog(s) of this gene implicated in reticular dysgenesis. Orthologous to human AK2 (adenylate kinase 2).

NR:

description
PREDICTED: adenylate kinase 2, mitochondrial isoform X1

GO:

id name namespace
GO:0002521 leukocyte differentiation biological_process
GO:0006139 nucleobase-containing compound metabolic process biological_process
GO:0016310 phosphorylation biological_process
GO:0005758 mitochondrial intermembrane space cellular_component
GO:0005524 ATP binding molecular_function
GO:0004017 adenylate kinase activity molecular_function

KEGG:

id description
K00939 adk, AK; adenylate kinase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011117 True 1736 mRNA 0.54 6 11855231 11860000

Neighbor

gene id symbol gene type direction distance location
AMCG00011118 NA coding downstream 1334 11839260 ~ 11853897 (-)
AMCG00011119 NA coding downstream 49474 11800761 ~ 11805757 (-)
AMCG00011113 NA coding downstream 87289 11704089 ~ 11767942 (-)
AMCG00011114 NA coding downstream 160901 11665124 ~ 11694330 (-)
AMCG00011112 NA coding downstream 193932 11653002 ~ 11661299 (-)
AMCG00011124 NA coding upstream 12604 11872604 ~ 11891098 (-)
AMCG00011130 NA coding upstream 31687 11891687 ~ 11899248 (-)
AMCG00011123 sfpq,LOC107558579,LOC107706594 coding upstream 47461 11907461 ~ 11917021 (-)
AMCG00011126 lypla2 coding upstream 58704 11918704 ~ 11924459 (-)
AMCG00011132 NA coding upstream 67100 11927100 ~ 11929873 (-)
G104449 NA non-coding downstream 158172 11663592 ~ 11697059 (-)
G104376 NA non-coding downstream 198398 11649005 ~ 11656833 (-)
G104342 NA non-coding downstream 260889 11587058 ~ 11594342 (-)
G104341 NA non-coding downstream 261612 11511223 ~ 11593619 (-)
G104319 NA non-coding downstream 429006 11420749 ~ 11426225 (-)
G104513 NA non-coding upstream 117351 11977351 ~ 11978288 (-)
G104545 NA non-coding upstream 179169 12039169 ~ 12039376 (-)
G104568 NA non-coding upstream 216728 12076728 ~ 12144122 (-)
G104591 NA non-coding upstream 275968 12135968 ~ 12142015 (-)
G104598 NA non-coding upstream 296442 12156442 ~ 12156731 (-)
AMCG00011086 NA other downstream 2111446 9741133 ~ 9743785 (-)
AMCG00011084 dlgap3,LOC106933674,LOC106958363 other downstream 2235952 9601377 ~ 9619279 (-)
AMCG00011058 srrm1,LOC107583602,LOC107721297,LOC106579139 other downstream 2619003 9222268 ~ 9236228 (-)
AMCG00011051 NA other downstream 2991180 8819551 ~ 8864051 (-)
G103832 NA other downstream 3828200 7938137 ~ 8027031 (-)
AMCG00011125 eef1a1l2,LOC107589444,LOC107706209,LOC107654701,LOC100136525,LOC105027913 other upstream 99238 11959238 ~ 11971002 (-)
AMCG00011140 NA other upstream 130829 11990829 ~ 11997786 (-)
AMCG00011135 NA other upstream 206495 12066495 ~ 12069079 (-)
G104629 LOC100194717,LOC107660902,LOC107754487,LOC107655673 other upstream 466097 12326097 ~ 12328282 (-)
AMCG00011152 kcnip1 other upstream 567993 12427993 ~ 12457327 (-)

Expression


Co-expression Network