G103395


Basic Information

Item Value
gene id G103395
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 5704770 ~ 5748564 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU129184
aGGTAGAGATCGAGAAGCTGGACTACCACCACTATCTGCCGCTGTTCTTCGATGGGCTGTGTGAGACTGTGCACCCCTACGAGTTCTTCTCACGGCAGGGCGTGCACGACTTGCTGGAACACGGCGGCACCAAGATCCTGCCTGTAATCCCCCAGCTGATCATCCCCATTAAGATCAACTCTGGAGATGGGATTGACTACAGCCAGCAGAAGAGGGAGAATATCGGGGATCTGATCCAGGAGACCCTGGAGGTGTTTGAGCGCTATGGAGGGGAGGACGCCTTTATTAACATCAAATACATGGTCCCCACATACGAATCCTGTATGCTTACCTGAGGGGGCATTCAGTCAACCTCCCCCACAATCCTCTTCCACAGACCCCACTACCCACCCCTCTACACTAGATATTAAAATCATAActcaacataaaatacattctttaaagCATTCTTTTTATCTTGACTTTTTTATGGCGGGCTGTTGAGGCTCTAATATCTTCTCTCTCCTGATCTCTGCTAGTGTTAGAGTATGTTGGTTAAATGATTCCACACTACATTAGATTTTGCTTCATTGCAGTGTTCATTCCAGACTTCTTTTGGTCTTGATCTTAAAAccaaaactgtaaataaataagtaaataaaggtttgatttaaaatggaatTGTAGAATTGTGTCTCCCACAAAGGGCATTCATCTTCCTTTTATATGTATCAACTATTAACTCCAGTCCAATTAAAAGGTCTATCAATAATCCAAGCCATAGAAAGGGacagaaattgtttttaatgtatgctACCAACCTCTGCAGAGTAGTACCCCACCCCCCTTATATAGAGCCTTTGCATCATATATACTGACTGAGTGTTGTCACATCAGAAGAAAAAGCTCAGTAAGCGAATGGTGATGGTTTTGAGAGATGAAAAGACTGATAGGGATGAGAAGTGTGGCATCAGTGTCCACCGCTTGTTGTTCTGGCTGTAAGTTCTACCCATCACTGACACAGTTCAAATCCAGACCACTGAACCTCTCAACCCAAGTAGCGGTAAGGCTAACATTTTCCCTTTGCGGTATTATGTCAGGATGTTACATGTGCCAGTCTGGCCTGCTGGCCTCTGCCTGTGTTTCCATAGAGAGACATCGAATAAGAAGAAAAAggccaaacaaaaacatgtcctGGATTCCTCTAGGAGAAAATGACACCAGCAGAGGGCAAAGGATCCTGGGAGGTGCAGTTGCGGGGCCCTGTATGAAGATGTATTGTCAATGAACTGGATGTATCAGGAGgttgaaagaaaagaaaaaaacaaaaacaataaaacgaAACTGATGCAA

Function

GO:

id name namespace
GO:0048731 system development biological_process
GO:0030154 cell differentiation biological_process
GO:0048856 anatomical structure development biological_process
GO:0048869 cellular developmental process biological_process
GO:0007399 nervous system development biological_process
GO:0032502 developmental process biological_process
GO:0007417 central nervous system development biological_process
GO:0021514 ventral spinal cord interneuron differentiation biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129184 True 1332 TUCP 0.44 2 5704770 5748564

Neighbor

gene id symbol gene type direction distance location
AMCG00010960 NA coding downstream 10985 5693444 ~ 5693785 (-)
AMCG00010958 NA coding downstream 31093 5655019 ~ 5673677 (-)
AMCG00010954 qkia,LOC107697705,LOC107721620,LOC107590898,LOC107711937,LOC105908305 coding downstream 51742 5644276 ~ 5653028 (-)
AMCG00010955 qki,LOC107721620,LOC107697705,LOC107590898,LOC106922399 coding downstream 79241 5620295 ~ 5625529 (-)
AMCG00010952 NA coding downstream 214888 5482336 ~ 5489882 (-)
AMCG00010965 pacrg,LOC107697704,LOC107583491,LOC107695182 coding upstream 156582 5905146 ~ 5924778 (-)
AMCG00010968 NA coding upstream 229358 5977922 ~ 5989279 (-)
AMCG00010971 dnajc8 coding upstream 255399 6003963 ~ 6014817 (-)
AMCG00010972 NA coding upstream 280316 6028880 ~ 6032424 (-)
AMCG00010970 NA coding upstream 326047 6074611 ~ 6077628 (-)
G103362 NA non-coding downstream 88917 5558677 ~ 5615853 (-)
G103329 NA non-coding downstream 326544 5359975 ~ 5378226 (-)
G103309 NA non-coding downstream 370513 5331732 ~ 5334257 (-)
G103149 NA non-coding downstream 1279198 4425354 ~ 4425572 (-)
G103095 NA non-coding downstream 1552022 4152518 ~ 4152748 (-)
G103473 NA non-coding upstream 635917 6384481 ~ 6386604 (-)
G103503 NA non-coding upstream 765299 6513863 ~ 6514123 (-)
G103539 NA non-coding upstream 875517 6624081 ~ 6627452 (-)
G103556 NA non-coding upstream 1006729 6755293 ~ 6762139 (-)
G103645 NA non-coding upstream 1367420 7115984 ~ 7171805 (-)
AMCG00010946 NA other downstream 379346 5284330 ~ 5325424 (-)
AMCG00010939 NA other downstream 564261 5134053 ~ 5140509 (-)
AMCG00010937 NA other downstream 575629 5115715 ~ 5129141 (-)
AMCG00010925 srsf10,LOC108426370,LOC101486875 other downstream 1054364 4642652 ~ 4650406 (-)
G103112 NA other downstream 1518796 4169793 ~ 4185974 (-)
AMCG00010966 NA other upstream 216569 5965133 ~ 5974307 (-)
AMCG00010988 NA other upstream 880006 6628570 ~ 6644723 (-)
G103832 NA other upstream 2189573 7938137 ~ 8027031 (-)
AMCG00011051 NA other upstream 3070987 8819551 ~ 8864051 (-)
AMCG00011058 srrm1,LOC107583602,LOC107721297,LOC106579139 other upstream 3473704 9222268 ~ 9236228 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location