G103539


Basic Information

Item Value
gene id G103539
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 6624081 ~ 6627452 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU129370
gtctgttTGGGCATAGGAATGCaatagcaaatacatttttcacatgtgctcgtattatttatcattttgctttttttgtcagttttactCAGTAATAATTGGCTATAGATCATGCTGATATAATCTTAAActaatatttacacaaaaatgTTATGTATGATTATTCCAAGTACACATCAACTTTATTTCATGGACATGTCTAGGCTTTTAATGACTAACCAATGGCCTTTTCCTTCAATACTGCAGCGCCTGATTTCAGaattcagatatatatatttagattaagGAAGCTTTTTTTTGTCAGCACACTACTGCCACTATCTTGTAGTTCCCAGAAGAGGACAAATTCCCAATCACTGTTGGACTATTTATATCAATATTCGTATCAGGCGTGCTGTGGGTTTACATTGTGCCTGCTGTGTATATTGCAGACGCACATCTGTGCTCTGAAGGCTGTCACTGAGGTGGTCTTGAACGTGAACCGCTAGACTACAGCGCACAAAGAGAATAAAGCTGACATTGTCAGACCAATTCTAATCTAATTTCTGTAGCATGTagtgaaagaaaggaaaataaacaggcaGTACAGGTTTTGacttacagtaaatacaaatgcaattttatatttataatttataatgataatgcaatattatcattcattgttttatacACTCCTTTATCTTTGTAGTCAAttatatcatttgtttttcaccagCACATCAGTGCAATACAATAGTTCCGAAAGTGCACAATCAGAATGAATTTGGATAGCTATCAATGTCCTGAAGGATTGTCAGATTTTGTCGTTTAGTAGACTACACATCTTAAAATAACACTTGAATCAGGAGTCTCCTCCCCTTGTTTCCAGATCTGGTTGAGAGACGAAAATCTTACACATCAAccccatttttatatatatatattttatactatCAATTCAGAATCAAATTATATAAGCACAAGCTACTGAATCATTTTGGTAGTTGAGAAATCGGTAGTATATGTctttgtgatttattaatttattttttaattgctaaaACACACCAAAGCAAGTTTCTCTTCTTCATGTTACTGACTTTTAGAAACGGCTAACatcaaaacaacaggaaaaaagatCATCCCATAAGAATGTAGGATTTCCTGAGATTGAAGTAACAAGAGTATATTAAttctgtacttttatttattatttttgttttccagtaatAGCAAGTCtcaattaaaactttttaaatcacatcaaaacacacagtatagactctatactatactatactgtactatagagaatgtatgtttattaaatatacacattcagttatttataaaaGAAACCTTTTCTTACATGCaccatatatatctatacatataatttcctctttaaatgaatacataatagcACGGGTGTTTACAATCTTGAGTCAGTCTTATaacctttgaaaatatttaaaatgatgctTTTTTCATGAAAGCCATCAGTTTAAATGGTGTGCCCTTCACCCAAAAGGGACTGTTTGAAACTTACACGATCAAAGTATTGAATTTATCCAGACCGATCCCCAAAATAATGCATCTTTGTTTGAGAAGAAGCAGATGGCGTAGGGGCAGACGGAAATCCATTTGTTTAAACAGTGAGCTGAAAACCGCCTTATCAATATTCACATTGATGAACCTATTTAGACATTAAAGTAAATGATACAGGGGCTTACACAAATTATATCAATGAGTTAGAGATAGAAAGCCAGTCTGTGGggttataattaatattttagtagGCAAAGCTATAATACTTTCAGTACCTATAGAATATATTAACAATTAACTACTTTCATTGTCCTTCTCTGAGTTAGTCGGTACATTGCATGTTTCTTCCTCTCTGTAATAACTCAGTGCTGGGACGGAGTTGAGCTGTCTGGAAAAAGGTTGGGAACCCCATTACAGAATGAACTAGCTGTTTTGTCCAGGTGTCTTGTAATGTGTTGATGGACAATGGAAACCAATGTGGTTTTCAAAGGTGGGTTTTCACATCTAATGAGTGTACATACCTAtatctgtgtgcgtgtgagtgtgtgtactgCGCACGCGTGTATGTATGTTGCTCTTTCTATACATATATCTACACTTTTGCTCTGGCAGAAAATAACCTTTAGGGGGAGCTGCTGTGCGATGGGAGAGGCGAGCAGTGGGGTGAGGAGTGTGAAATTCTGAAGGCATCCTAATCTTGAACATCTGAAGGCCCATCTCCTGGTGACTATTTTTGATGCATCTTGCACCCGTGCTTGTGTTGTATCCCATGGGAACAAGATGGCCAGCATTTACAACTCAGACAACGCCGACTTTGACTCTGGGGGGCACTTCTTAACAGTGACTACAATCGCGTGGATAAAACATGTGGAGGTTTTCCGTATCCAATGCTTAAGAGAAGCTGCGTTCAGGTCAGCCAAAAAGAACCAAATTCTGTGATGAGGTTCTCCCTTATGAATATATGCTGAAAGGAACCCATATGCGATATATTAACCTCACCAGTTGGCTTTTCCCAAACCATAGtggtttctgttctgttctattCACATATTGTGTCTGTTTATTCCAAAGTATTGACACCGTAGTGGATTTCcttaatatacatgtatgatGACCCTACCTAAAATAGCAGGCAATTTCAAAGTCTTCTTTTTCCATACCTGTTTGCAGTGGTACAGTAGATTAAGCTTTGGTTAAAGGATACTCTcagatattgtattttatatgtacatgTTTCAGTGTAGAAGCACtactgtgaaaatgtataactGATTACCAATCACAATTGGCTGCCCTCTATGATAGTGACTGAAACTTTAGTTATATTAGATTATATTCTTTCTCATGTTGCTGCACTTGTTAGTTGCTGGCATGTATGGAAGTGAAGTCACAGACTTTATAACGACCTGCTTCTTAAAAGGTTATTGGGAAAGTGATTGGGAAATGTTTTATGGATTTTGAAAAACCTGCTTTTGTTGATGTCTTCTGTAACatgaaactgaaagcaaataCAACTTTCCCCCCCAGAAAAGACTAAAATCAGtcaaaaatcaataataaagtgACTATAACTAATGTATTTAGCACACCACATGACTAACAGTTGAAATTGtggatgtgtaaataaatggtTGTTTTATAACAATAAGTGTACTGTGAGTTTGGGTTTATCCAGGGTTTTGCAAATTCGGTGTAACTAAGGGCGAAATTGAAAGGAAGATTGTGTCATTTCTACTACCCTGTGTTTTTCTATACATACTGTCTGTTCATTCTTTTGTTTCTAGAGGATATTTATGTTCCTCCGTGTATGAATCTTGTGTCACTAATTTGCTATGCTGTCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129370 True 3372 lncRNA 0.35 1 6624081 6627452

Neighbor

gene id symbol gene type direction distance location
AMCG00010985 NA coding downstream 11329 6594655 ~ 6612752 (-)
AMCG00010982 NA coding downstream 63157 6556648 ~ 6560924 (-)
AMCG00010983 NA coding downstream 88285 6520570 ~ 6535796 (-)
AMCG00010984 NA coding downstream 114158 6475982 ~ 6509923 (-)
AMCG00010977 NA coding downstream 181340 6423566 ~ 6442741 (-)
AMCG00010987 NA coding upstream 137374 6764826 ~ 6775506 (-)
AMCG00010992 ppce,LOC107654745,LOC107710331,LOC105909065,LOC107602379 coding upstream 298318 6925770 ~ 6938226 (-)
AMCG00010997 NA coding upstream 486183 7113635 ~ 7126366 (-)
AMCG00011003 NA coding upstream 681187 7308639 ~ 7309421 (-)
AMCG00011006 NA coding upstream 737790 7365242 ~ 7390566 (-)
G103503 NA non-coding downstream 109958 6513863 ~ 6514123 (-)
G103473 NA non-coding downstream 237477 6384481 ~ 6386604 (-)
G103362 NA non-coding downstream 1008228 5558677 ~ 5615853 (-)
G103329 NA non-coding downstream 1245855 5359975 ~ 5378226 (-)
G103309 NA non-coding downstream 1289824 5331732 ~ 5334257 (-)
G103556 NA non-coding upstream 127841 6755293 ~ 6762139 (-)
G103645 NA non-coding upstream 488532 7115984 ~ 7171805 (-)
G103658 NA non-coding upstream 561633 7189085 ~ 7189583 (-)
G103666 NA non-coding upstream 603502 7230954 ~ 7233314 (-)
G103794 NA non-coding upstream 1149556 7777008 ~ 7779941 (-)
AMCG00010966 NA other downstream 649774 5965133 ~ 5974307 (-)
G103395 NA other downstream 875517 5704770 ~ 5748564 (-)
AMCG00010946 NA other downstream 1298657 5284330 ~ 5325424 (-)
AMCG00010939 NA other downstream 1483572 5134053 ~ 5140509 (-)
AMCG00010937 NA other downstream 1494940 5115715 ~ 5129141 (-)
AMCG00010988 NA other upstream 1118 6628570 ~ 6644723 (-)
G103832 NA other upstream 1310685 7938137 ~ 8027031 (-)
AMCG00011051 NA other upstream 2192099 8819551 ~ 8864051 (-)
AMCG00011058 srrm1,LOC107583602,LOC107721297,LOC106579139 other upstream 2594816 9222268 ~ 9236228 (-)
AMCG00011084 dlgap3,LOC106933674,LOC106958363 other upstream 2973925 9601377 ~ 9619279 (-)

Expression


Co-expression Network