G105769


Basic Information

Item Value
gene id G105769
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 17751250 ~ 17751484 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU132310
acaggtcccccttttgccgccaaaacagccctgacccgtcgaggcatggactgcactagacctctgaaggtgtgctgtgggatctggcaccaagacgtcagcagcagatcctttaagtcctgtaagttgcgaggtggggcctccatggatcggacttgtttgtccagcacatcccacagatgctggattggattgagatctggggaatttggaggccaagtcaacaccttgaact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132310 True 235 lncRNA 0.54 1 17751250 17751484

Neighbor

gene id symbol gene type direction distance location
AMCG00011310 gblp,LOC108268614,LOC107599381,LOC103033914,LOC108441034 coding upstream 830 17745662 ~ 17750420 (+)
AMCG00011312 NA coding upstream 171534 17571125 ~ 17579716 (+)
AMCG00011308 LOC108441031 coding upstream 183022 17563585 ~ 17568228 (+)
AMCG00011307 rasgef1c,LOC102777120 coding upstream 194880 17544765 ~ 17556370 (+)
AMCG00011309 NA coding upstream 324752 17417595 ~ 17426498 (+)
AMCG00011306 NA coding downstream 1290 17752774 ~ 17755758 (+)
AMCG00011305 hnrnpab,LOC103028658,LOC106611940 coding downstream 6342 17757826 ~ 17761783 (+)
AMCG00011324 gria1,LOC108427845 coding downstream 318917 18070401 ~ 18076037 (+)
AMCG00011320 gria2,LOC107575061,LOC108411138 coding downstream 340632 18092116 ~ 18098073 (+)
AMCG00011323 NA coding downstream 449157 18200641 ~ 18211863 (+)
G105756 NA non-coding upstream 8863 17734990 ~ 17742387 (+)
G105715 NA non-coding upstream 372390 17378620 ~ 17378860 (+)
G105684 NA non-coding upstream 439182 17309759 ~ 17312068 (+)
G105538 NA non-coding upstream 1026097 16724688 ~ 16725153 (+)
G105466 NA non-coding upstream 1550951 16200049 ~ 16200299 (+)
G105776 phykpl,LOC100691570 non-coding downstream 14407 17765891 ~ 17768221 (+)
G105792 NA non-coding downstream 248152 17999636 ~ 18000343 (+)
G105794 NA non-coding downstream 281271 18032755 ~ 18033025 (+)
G105811 NA non-coding downstream 423871 18175355 ~ 18247768 (+)
G105858 LOC105030512,LOC106609167,LOC106569888 non-coding downstream 865366 18616850 ~ 18617065 (+)
AMCG00011293 plac8l1 other upstream 769009 16978492 ~ 16982241 (+)
AMCG00011268 NA other upstream 1640869 16105586 ~ 16110381 (+)
G105373 cssa04h5orf24,pcbd2,LOC105890513,LOC100699409 other upstream 1767171 15963340 ~ 15984079 (+)
AMCG00011255 LOC106603967,LOC105011194,LOC108410970 other upstream 1877761 15863032 ~ 15873489 (+)
AMCG00011252 NA other upstream 1895466 15853764 ~ 15855784 (+)
G105778 LOC105024433,LOC107752029,LOC107743918,LOC106604409 other downstream 32679 17784163 ~ 17788050 (+)
AMCG00011328 NA other downstream 1355789 19107273 ~ 19117369 (+)
G105916 NA other downstream 1470571 19222055 ~ 19222421 (+)
G106139 LOC108275110 other downstream 2343745 20095229 ~ 20162966 (+)
AMCG00011365 LOC108438827,LOC108243066,LOC107376386 other downstream 2544527 20296011 ~ 20339325 (+)

Expression


Co-expression Network