G107729


Basic Information

Item Value
gene id G107729
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 29676592 ~ 29676880 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU134719
tttctatcagaaccagcattaactttttcagcaatttgagctacagcctgttggatcggaccacatgggccagccttcactccccacgtgcatcactgagccttggccgcccatgaccctgttgccggttcaccgcttttcctttcttgaaccacttttgataggtactgaccactgcagaccgggaacaccacACAAGAGATGCAGTTTTGGAGTTGCTCTGACTCAGTCGTCTAACCaccacaatttggcccttgtcaaagtcgctcagatccttaagcTTGCCcaa

Function

GO:

id name namespace
GO:0050793 regulation of developmental process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU134719 True 289 lncRNA 0.51 1 29676592 29676880

Neighbor

gene id symbol gene type direction distance location
AMCG00011533 NA coding upstream 25580 29644168 ~ 29651012 (+)
AMCG00011530 NA coding upstream 239874 29417923 ~ 29436718 (+)
AMCG00011529 dbn1,LOC107732329,LOC107692779,LOC107561701 coding upstream 259329 29371879 ~ 29417263 (+)
AMCG00011527 NA coding upstream 354735 29279389 ~ 29321857 (+)
AMCG00011526 LOC106568009 coding upstream 402097 29222351 ~ 29274495 (+)
AMCG00011538 LOC108439763,LOC104968126,LOC108278891 coding downstream 326320 30003200 ~ 30057500 (+)
AMCG00011542 LOC105026271 coding downstream 505522 30182402 ~ 30194886 (+)
AMCG00011545 NA coding downstream 560435 30237315 ~ 30243219 (+)
AMCG00011548 NA coding downstream 582658 30259538 ~ 30261357 (+)
AMCG00011547 NA coding downstream 756094 30432974 ~ 30444408 (+)
G107714 NA non-coding upstream 50534 29625741 ~ 29626058 (+)
G107712 NA non-coding upstream 51205 29625090 ~ 29625387 (+)
G107709 NA non-coding upstream 78349 29598001 ~ 29598243 (+)
G107672 NA non-coding upstream 185722 29484872 ~ 29490870 (+)
G107661 NA non-coding upstream 352966 29321964 ~ 29323626 (+)
G107742 NA non-coding downstream 24932 29701812 ~ 29705904 (+)
G107766 NA non-coding downstream 114523 29791403 ~ 29791624 (+)
G107767 LOC100846954 non-coding downstream 117665 29794545 ~ 29795213 (+)
G107774 NA non-coding downstream 130210 29807090 ~ 29807357 (+)
G107781 NA non-coding downstream 154579 29831459 ~ 29832882 (+)
AMCG00011519 NA other upstream 800237 28869142 ~ 28876355 (+)
G107394 NA other upstream 1948725 27712206 ~ 27727867 (+)
AMCG00011488 NA other upstream 2833800 26818052 ~ 26842792 (+)
G107202 NA other upstream 2905378 26770438 ~ 26771214 (+)
AMCG00011476 NA other upstream 3315817 26356167 ~ 26360775 (+)
G107741 NA other downstream 20721 29697601 ~ 29699419 (+)
G107784 NA other downstream 181090 29857970 ~ 29875476 (+)
G107858 NA other downstream 494908 30171788 ~ 30212090 (+)
AMCG00011551 NA other downstream 1307099 30983979 ~ 31173789 (+)
AMCG00011559 UBE2D2,ube2d1,LOC105015883,LOC105029919,LOC107680290 other downstream 2425993 32102873 ~ 32204915 (+)

Expression


Co-expression Network