G107909


Basic Information

Item Value
gene id G107909
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 30405410 ~ 30448646 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU134930
ttctgtctctcactgttaaaatacacctaccattaaaattatagactgatcatttctttgtcagtgggcaaacgtacaaaatcagcaggggatcaaatacttttttccctcactgtagatatacactcacctaaaggattattaggaacaccatactaatactgtgtttgaccccctttcgccttcagaactgccttaattctacgtggcattgatttaacaaggtgctgaaagcattctttagaaatgttggcccatattggatagcatcttgcagttgatggagatttgtgggatgcacatccagggcacgaagctcctgTTCCACATCCAAATATGAAAAAGAGGCTACAATTTGCACAAGCTCACCAAAATTGGACAGTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU134930 True 385 lncRNA 0.40 2 30405410 30448646

Neighbor

gene id symbol gene type direction distance location
AMCG00011548 NA coding upstream 144053 30259538 ~ 30261357 (+)
AMCG00011545 NA coding upstream 162191 30237315 ~ 30243219 (+)
AMCG00011542 LOC105026271 coding upstream 210524 30182402 ~ 30194886 (+)
AMCG00011538 LOC108439763,LOC104968126,LOC108278891 coding upstream 347910 30003200 ~ 30057500 (+)
AMCG00011533 NA coding upstream 754398 29644168 ~ 29651012 (+)
AMCG00011550 nrg2,LOC102784840,LOC100711745,LOC102211978 coding downstream 187736 30636382 ~ 30637300 (+)
AMCG00011552 NA coding downstream 748220 31196866 ~ 31203698 (+)
AMCG00011555 NA coding downstream 1152861 31601507 ~ 31602428 (+)
AMCG00011556 NA coding downstream 1221499 31670145 ~ 31709275 (+)
AMCG00011562 LOC102778048,LOC104948140 coding downstream 1860920 32309566 ~ 32423292 (+)
G107857 NA non-coding upstream 235030 30170001 ~ 30170380 (+)
G107817 NA non-coding upstream 411141 29986595 ~ 29994269 (+)
G107781 NA non-coding upstream 572528 29831459 ~ 29832882 (+)
G107774 NA non-coding upstream 598053 29807090 ~ 29807357 (+)
G107767 LOC100846954 non-coding upstream 610197 29794545 ~ 29795213 (+)
G107932 LOC101154678 non-coding downstream 25667 30474313 ~ 30493033 (+)
G107937 NA non-coding downstream 44711 30493357 ~ 30493741 (+)
G107962 NA non-coding downstream 227979 30676625 ~ 30676996 (+)
G107971 NA non-coding downstream 453971 30902617 ~ 30902827 (+)
G107987 NA non-coding downstream 770669 31219315 ~ 31219537 (+)
G107858 NA other upstream 193320 30171788 ~ 30212090 (+)
G107784 NA other upstream 529934 29857970 ~ 29875476 (+)
G107741 NA other upstream 705991 29697601 ~ 29699419 (+)
AMCG00011519 NA other upstream 1529055 28869142 ~ 28876355 (+)
G107394 NA other upstream 2677543 27712206 ~ 27727867 (+)
AMCG00011551 NA other downstream 535333 30983979 ~ 31173789 (+)
AMCG00011559 UBE2D2,ube2d1,LOC105015883,LOC105029919,LOC107680290 other downstream 1654227 32102873 ~ 32204915 (+)

Expression


Co-expression Network