G107962


Basic Information

Item Value
gene id G107962
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 30676625 ~ 30676996 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU134997
gggacctgtacaaactggatggtctacatcttaacagaaggggggctaatgcattgggagagcgtatgtgcagagtaattgagaatcttttgaactagggaccaggggggcagggagctctgacaatgggagaagTTCCActaagtaaagaaaacaaagggaaactgctagtaggaaagtcctgaaatgtttgtacctcaatgccaggagtataaggaacaagatgttagacctagaagccacagtgctggcatgtgactatgatgttgtagaagtgacagaaacatggcttacagaaaatgttgggtcttgaatacaagttgaaaggatacacacagtttaggagacaCCGGCATAATCAGAGAGGTCGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU134997 True 372 lncRNA 0.45 1 30676625 30676996

Neighbor

gene id symbol gene type direction distance location
AMCG00011550 nrg2,LOC102784840,LOC100711745,LOC102211978 coding upstream 39325 30636382 ~ 30637300 (+)
AMCG00011547 NA coding upstream 232217 30432974 ~ 30444408 (+)
AMCG00011548 NA coding upstream 415268 30259538 ~ 30261357 (+)
AMCG00011545 NA coding upstream 433406 30237315 ~ 30243219 (+)
AMCG00011542 LOC105026271 coding upstream 481739 30182402 ~ 30194886 (+)
AMCG00011552 NA coding downstream 519870 31196866 ~ 31203698 (+)
AMCG00011555 NA coding downstream 924511 31601507 ~ 31602428 (+)
AMCG00011556 NA coding downstream 993149 31670145 ~ 31709275 (+)
AMCG00011562 LOC102778048,LOC104948140 coding downstream 1632570 32309566 ~ 32423292 (+)
AMCG00011564 LOC106563625,LOC105010896,LOC107589094,LOC101168142 coding downstream 1755844 32432840 ~ 32436433 (+)
G107937 NA non-coding upstream 182884 30493357 ~ 30493741 (+)
G107932 LOC101154678 non-coding upstream 183592 30474313 ~ 30493033 (+)
G107909 NA non-coding upstream 227979 30405410 ~ 30448646 (+)
G107857 NA non-coding upstream 506245 30170001 ~ 30170380 (+)
G107817 NA non-coding upstream 682356 29986595 ~ 29994269 (+)
G107971 NA non-coding downstream 225621 30902617 ~ 30902827 (+)
G107987 NA non-coding downstream 542319 31219315 ~ 31219537 (+)
G108023 NA non-coding downstream 868318 31545314 ~ 31545605 (+)
G108025 NA non-coding downstream 885169 31562165 ~ 31562457 (+)
G108032 LOC107575789,LOC100846954 non-coding downstream 898597 31575593 ~ 31575893 (+)
G107858 NA other upstream 464535 30171788 ~ 30212090 (+)
G107784 NA other upstream 801149 29857970 ~ 29875476 (+)
G107741 NA other upstream 977206 29697601 ~ 29699419 (+)
AMCG00011519 NA other upstream 1800270 28869142 ~ 28876355 (+)
G107394 NA other upstream 2948758 27712206 ~ 27727867 (+)
AMCG00011551 NA other downstream 306983 30983979 ~ 31173789 (+)
AMCG00011559 UBE2D2,ube2d1,LOC105015883,LOC105029919,LOC107680290 other downstream 1425877 32102873 ~ 32204915 (+)

Expression


Co-expression Network