AMCG00012049


Basic Information

Item Value
gene id AMCG00012049
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 9311422 ~ 9318636 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012049
gaaatatttaaattattgtaatagtattgttataatatttataataataataattattattattattattattcagcagCTGGTGATTGGTGGAAGCAGGAAGGGGAGAACATGTGCATTTGAAGCGATACAGTTCCCCAAATTTCTGCCATACAGCTTTACGTACTGCTCACTTGTCAAGTGACTTTACTTATCAAAatattactaataaaaataatgattatattcCATTTTATGTGGGTAACACATCTTTTATCGTTGTGGATTTTGgCTTCTTACAGCTCTGCAGAGACTCTCCAAACAATCCATGGGGTTTTAAATGGAACCATCATATTACCATCTGggatacagaaaaacacatttacccAGATCCAGTGGTCAACAGGTGGCAAGTTAATTGCCTTAGGAATTGGTGAAGAAGTCAATGTTAACAGATTACCTCGCTTTCGTGGTAGACTAAGTCTCTTCCAAGAAAATGGATCTTTGCAGATCAATAGAACAGAAATGGGAGATCAATCAGTTTACAGAGTTAAAGCAATCTATGAAGATGGAAATGAGTATAACAAAGAACTCCAACTTTTGGTATATGaaaagATCAATAAACCAAAACTGgaactgaagaaaaatgtttcCACCTTGGGAATCTGCAATATCTCTGTTACATGCTCCATGGGCATAGATGTTTTTTGCGCTGCTGACTGTGACAACACACAAGGTGCATTTCTCTGTTCTAAGTGTGATTACACTGACTCCAGTTTTTCTACATCACTCACTGTTACCAGCAACGGCAGCTCTATTGTGTGTACCAGCAGTAATCCAGTCAGTAAGGATTCAGATGTTCTTGTAAATGTCTGTCCACACCAAGACAAGGccaaagagcaaataaataaagttaagaCTAGAAAAGTAGGCTCCCATCAGAAGGATTCTCCAGAAGACTCCCATCAGAAGGATTCTCCAGAAGACTCCCATCAGAAGGATTCCCCATTAGACTCCCCTCGGAAGGATTCTCTAGAAGATTCTCTTCAGAAGGATTCTCCAGAAGACTCCCATCAGAAGCATTCTCCAGAAGACTCCCATCGGAAGGATTCTCTAGAAGATTCTCTTCAGAAGGATTCTCCAGAAGACTCCCATCAGAAGGATTCTCCAGTAGACTCCCATCAGAAGGATTCCCCATTAGACTCTCCTCAGAAGGATTCTCTAGAAGACTCTCTTCAGAAGGATTCTCCAGAAGATTAATGCTGTTTTCTCATATACAtatgaatgtacaaataatagaaTGTTGATAACATAACAAAAGATTGCAGACACGTGGCACtcgcctctgtccagcacaAGTTGTTGTTGCCCTAAAcactgtctcttggtttttgtaccctaattcaactgcttgacctcttgtcaccgagaaacagcagatttacttcaattaaggcagatCTAAAaaagattaggaatgctaagactttctcctctctctcacctgtcccgTGACTGACTTGGGTAACTCCTGAACACTtcctttgtctttttgtttctctacAACTGCTTAAGTACCTTTGTGTTCAGCTTCTGgccaccaattgacacctcactgactcCACCTCCAGAATCCCAAACTAggtcacatttatatattatagcctacatcagtgtttctcaacctGCACTTTCAGCTCTCAGTTATTTAAGCAAACCgtatttcctgttattttcagcTCTCATGTGTTGGTTGATAATTCCATTCAAGGTTTCAATGAAACAAGTGAGTGCTctgttagaacaaaaaccagcagacaccaGGAGAATCCCTGCCTACATTAAATGCTCAAACTTTATGAACTGTCTGTTGCATTTACTTAAGTAGCCAAATgtatgatatgcatatttatataaaatcaagtaaataataacaatacataatcaataaattaaattttatttcaaaacca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012049 True 1952 mRNA 0.38 4 9311422 9318636

Neighbor

gene id symbol gene type direction distance location
AMCG00012048 NA coding upstream 3615 9305545 ~ 9307807 (+)
AMCG00012047 NA coding upstream 37806 9272074 ~ 9273616 (+)
AMCG00012046 NA coding upstream 45608 9265009 ~ 9265814 (+)
AMCG00012044 NA coding upstream 55222 9241689 ~ 9256200 (+)
AMCG00012041 vangl2,LOC107706024,LOC107686095,LOC107702770,LOC107707319 coding upstream 74146 9223227 ~ 9237276 (+)
AMCG00012052 NA coding downstream 119691 9438327 ~ 9440627 (+)
AMCG00012055 NA coding downstream 190105 9508741 ~ 9534241 (+)
AMCG00012056 NA coding downstream 223378 9542014 ~ 9544985 (+)
AMCG00012067 NA coding downstream 316860 9635496 ~ 9643331 (+)
AMCG00012057 LOC107713649,LOC107698496,LOC107600231,LOC106569574,LOC105905623,LOC107676327 coding downstream 341113 9659749 ~ 9673361 (+)
G134141 NA non-coding upstream 115505 9194562 ~ 9195917 (+)
G134084 NA non-coding upstream 422476 8888717 ~ 8888946 (+)
G134068 NA non-coding upstream 508544 8802523 ~ 8802878 (+)
G134035 NA non-coding upstream 607454 8703749 ~ 8703968 (+)
G134034 NA non-coding upstream 608824 8702349 ~ 8702598 (+)
G134222 NA non-coding downstream 82818 9401454 ~ 9414917 (+)
G134236 NA non-coding downstream 215678 9534314 ~ 9538974 (+)
G134259 NA non-coding downstream 248644 9567280 ~ 9571718 (+)
G134284 NA non-coding downstream 327390 9646026 ~ 9646444 (+)
G134292 eif3f,LOC105905622 non-coding downstream 335216 9653852 ~ 9654600 (+)
AMCG00012043 NA other upstream 1491 9279988 ~ 9309931 (+)
G133974 NA other upstream 748208 8561042 ~ 8563214 (+)
AMCG00012008 NA other upstream 790774 8510011 ~ 8520648 (+)
AMCG00012006 NA other upstream 914381 8378333 ~ 8397041 (+)
G133822 NA other upstream 1256401 8052124 ~ 8055021 (+)
G134291 NA other downstream 332713 9651349 ~ 9653234 (+)
G134295 NA other downstream 337721 9656357 ~ 9656727 (+)
G134338 NA other downstream 534254 9852890 ~ 9867143 (+)
G134340 NA other downstream 617290 9935926 ~ 9936411 (+)
G134357 NA other downstream 715550 10034186 ~ 10034693 (+)

Expression


Co-expression Network