AMCG00012121


Basic Information

Item Value
gene id AMCG00012121
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 11213608 ~ 11224284 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012121
GCTGATGGGCAGAGTGATGTGTGCGGGCGTCCCCCCCTCAACACACGCATCGTTGGGGGGCAGAACGCCAGCAGGGGGGCCTGGCCCTGGCAAGCCAGTCTGCAGATCGGCAAGCCCATTAATGTCACTCAGTGGACGGTGGTCCTGGGCAGGCTGAGCCTCCTGGTCACCGACTCCAATGAAGTGACCAGAAGTGTCCTGAACGTCATCCCGCACTCTAGCTACAACTCACCAAATTTCAACAATGACATCGCCCTGCTACAACTGAGCAGCACTGTCACATTTACCAACTACATCCAGCCCATCTGTTTGGCAGCCCAGGGCAGCACCTTCTACGCTGGCACCAACTGCTGGGTCACCGGCTATGGCAACATCAGGGAAGATGTCTATCTCGATGGGAACAAGACCCTGCAGGAGGTGGAGCTGCCCATCATAGGGAACACGTGCTGCAGCTGTCAATATACAAAGCTGGTCAACATCACCAACAACATGATCTGTGCTTTAATGCCACTCGGGGGCAAAGGTTCATGCCAGGGTGACTCAGGGGGCCCCCTGGTGTGCAAGCAAAACTCTGTGTGGTCCCAGGCTGGGATCGTGAGTTTTGGGGTGGGCTGCGCGCGCCACAACTATTCAGACGTGTACACGCGTGTGTCCCAGTACCAGGACTGGATCAACTCTCAGCTGACCTCCGCCACCTCCCAGCCAGGTTTCGTCACCTTCACCTCCCCCGGCACGGAGAGCGACTCATGCAATGGCACAGCTTGGCGGGCTGCAGGGAATGGCAGGCTGCTCACCATTATGCTCACAGTAGCAGTCAGTGCCAAGACACTGATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012121 True 834 mRNA 0.58 5 11213608 11224284

Neighbor

gene id symbol gene type direction distance location
AMCG00012123 NA coding upstream 18260 11186768 ~ 11195348 (+)
AMCG00012108 NA coding upstream 232742 10980678 ~ 10980866 (+)
AMCG00012106 NA coding upstream 296470 10913410 ~ 10917138 (+)
AMCG00012107 NA coding upstream 304563 10905052 ~ 10909045 (+)
AMCG00012110 NA coding upstream 323361 10879944 ~ 10890247 (+)
AMCG00012122 NA coding downstream 22898 11247182 ~ 11248652 (+)
AMCG00012127 mapk7 coding downstream 78170 11302454 ~ 11312044 (+)
AMCG00012128 NA coding downstream 135955 11360239 ~ 11382588 (+)
AMCG00012140 NA coding downstream 155789 11380073 ~ 11380772 (+)
AMCG00012136 NA coding downstream 162289 11386573 ~ 11388762 (+)
G134615 NA non-coding upstream 230814 10967276 ~ 10982794 (+)
G134556 NA non-coding upstream 360317 10849858 ~ 10853291 (+)
G134498 NA non-coding upstream 614767 10598539 ~ 10598841 (+)
G134495 NA non-coding upstream 618202 10594849 ~ 10595406 (+)
G134378 NA non-coding upstream 943554 10269680 ~ 10270054 (+)
G134692 NA non-coding downstream 9397 11233681 ~ 11233883 (+)
G134698 NA non-coding downstream 76050 11300334 ~ 11302065 (+)
G134749 NA non-coding downstream 279676 11503960 ~ 11504648 (+)
G134766 NA non-coding downstream 486966 11711250 ~ 11766411 (+)
G134779 NA non-coding downstream 594973 11819257 ~ 11844832 (+)
AMCG00012112 NA other upstream 152578 11049065 ~ 11061030 (+)
G134613 NA other upstream 278501 10926606 ~ 10935107 (+)
AMCG00012088 NA other upstream 529511 10629684 ~ 10684097 (+)
G134343 NA other upstream 895790 10303273 ~ 10317818 (+)
G134373 NA other upstream 905769 10252810 ~ 10307839 (+)
G134697 fus,LOC103040960,LOC107658502 other downstream 17945 11242229 ~ 11293899 (+)
G134743 NA other downstream 212095 11436379 ~ 11446163 (+)
AMCG00012152 NA other downstream 394893 11619177 ~ 11870630 (+)
G134898 NA other downstream 806613 12030897 ~ 12031490 (+)
G134955 NA other downstream 948254 12172538 ~ 12172802 (+)

Expression


Co-expression Network