AMCG00012274


Basic Information

Item Value
gene id AMCG00012274
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 14416007 ~ 14423640 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012274
ctctctctctctctaactctctcAGATGTCAGTGGGTGTGTTCTCTGCCCCCCACAGGCTCTGGTCCATGGTTCGCCCGGTTTTGACAGAATCTGACCAAGACCTGTCAGCAGAGCCCCCCAACACCCACCCGAGCACTGATGGGGACCTGGGCATTAGCACTGTGCTtgaatGTGGATCTGTGGTCATGGCCTGTCAGTTCAACAGTGAGGGAACTCTATTGGCTGTCGGTCTGATCAATGGTACCATCCAGgTGTACAAGGTGGGCGATGCCAGTCCGGTCTACACTCTGAGAGACAGTCTCAGTGTGCAGTCTGCTCTGCCCGTCACTGCCCTGCGCTTCACACACTCCTCCTCACACTGCCTCCTGCTGGCCACCTATGCCAGTGGTGTTGTGCGGAGCTGGTATGTGTCAGGGGGCCAGTGTCTGTGGTTGGTgaaggaggaggggtggggcgAGGACGAAAGTCCGAGGCGGcagaccctctctctctccctcagcccCTCGAGCGAGCGAGTCGTCACGGCAGGGACAGACTGCCGGCTGCACCTGTACGACCTGCAGACCCACCAGAGGGTACAGACCTGCACCGCCAGGGTTTTCGCCGTGACCTTTCACCCCGAGAAAGAGACTGAGTTCATCTCCGGAGGCTGGGACAACACTGTACAGgaaggagagtgctCTAGAGtcCGTCTCTCGGTTGGTCGGGTTGCCATCGGCAGTGTTCAGTTGCTGTGTGTGTCCCGTAGGGGAAAGGGCGGGGCTTATCGCAGCATCATCGGGGAGCAGAGTCTTCCTATTGGAGGGGAAGCCACTCACAGGGATAAGACCAGAGTCCTCATAGAAGAAACTACACCTCCCACAAGGCACCGCAGCTCCAGACACTACAGACCCCGAGAGGCCCTTCAATACATACACCTTGCTATCCAGTGGGACTCCAGCGCAGCtctcacaacacaacacaactttAATTTGAGACTACATTTCCTGTGATTCAATGAAGATTAGTTCCCAAGTAGACCCTCAACTGTGAGTCTACAATTCCCATAATTCCCCAATTGAGAGACTACAGTTCCCATTGTGACCCTTACATTCGAAACTACAATTCTCATAATTCCCTGATTGAGAGACTAGTTTCCATTATGACATCTACATTTGAAACTTCAATTCCTATAATTTGATAACTAACTGCTTTGCACTGGACTGAGCTAGTCTGTACTGATTATATTGCACTGTACTAGATAACACTGTACTGGACTATATAGCACTGGGACTATTCTTCACTGGACTGCCCTGTCGGCCCACTGCACATGTGCACAGGAAGACTGGCATCAGGGCTGTTGTATACACTGCAGAGCTCCTGTAACCATTAACCAGAGCCCTGCACCGCTTACACTGTTGTCCCCTGATCCCAGTCTCTCAGTGATAGCCCTCCCTCAGCCGCCACTGATCTAATAAACAGCCCTG

Function

GO:

id name namespace
GO:0009653 anatomical structure morphogenesis biological_process
GO:0032502 developmental process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012274 True 1468 mRNA 0.53 8 14416007 14423640

Neighbor

gene id symbol gene type direction distance location
AMCG00012276 NA coding upstream 5567 14399113 ~ 14410440 (+)
AMCG00012266 NA coding upstream 43411 14337873 ~ 14372596 (+)
AMCG00012273 NA coding upstream 101571 14312287 ~ 14314436 (+)
AMCG00012263 NA coding upstream 216012 14186727 ~ 14199995 (+)
AMCG00012260 NA coding upstream 298038 14100100 ~ 14117969 (+)
AMCG00012277 NA coding downstream 4319 14427959 ~ 14434886 (+)
AMCG00012278 NA coding downstream 15068 14438708 ~ 14443094 (+)
AMCG00012275 NA coding downstream 21424 14445064 ~ 14452229 (+)
AMCG00012279 NA coding downstream 143727 14567367 ~ 14570192 (+)
AMCG00012284 asphd2,LOC105891569,LOC107687974,LOC106585499 coding downstream 200879 14624519 ~ 14627965 (+)
G135542 NA non-coding upstream 42062 14373040 ~ 14373945 (+)
G135540 NA non-coding upstream 47670 14368049 ~ 14368337 (+)
G135506 NA non-coding upstream 183744 14226990 ~ 14232263 (+)
G135366 NA non-coding upstream 459702 13927988 ~ 13956305 (+)
G135575 NA non-coding downstream 94576 14518216 ~ 14521605 (+)
G135582 NA non-coding downstream 111884 14535524 ~ 14538864 (+)
G135594 NA non-coding downstream 139936 14563576 ~ 14576998 (+)
G135595 NA non-coding downstream 146735 14570375 ~ 14610737 (+)
G135606 NA non-coding downstream 173490 14597130 ~ 14601583 (+)
AMCG00012267 NA other upstream 26322 14388038 ~ 14389685 (+)
G135544 NA other upstream 37312 14377672 ~ 14378695 (+)
G135541 adprh,LOC107387950,LOC101076629,LOC105024377,LOC103481379,LOC103381590,LOC107094293 other upstream 38356 14375633 ~ 14377651 (+)
AMCG00012268 NA other upstream 119348 14246763 ~ 14296659 (+)
AMCG00012262 LOC104967735 other upstream 232840 14173913 ~ 14183167 (+)
G135566 NA other downstream 11325 14434965 ~ 14435728 (+)
G135573 NA other downstream 160484 14584124 ~ 14585770 (+)
AMCG00012294 NA other downstream 286604 14710244 ~ 14726783 (+)
AMCG00012300 NA other downstream 540404 14964044 ~ 15245994 (+)
G135649 NA other downstream 564658 14988298 ~ 15009803 (+)

Expression


Co-expression Network