AMCG00012530


Basic Information

Item Value
gene id AMCG00012530
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 20843804 ~ 20847235 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012530
TAAGAGTGATAGCAACCATGAGAGGAGGGATTGTCTGTGTGGTTTTGTTGGTGGGTTCTGGCATAGTGTGGGTAGCTGAAGCCCTGCAGTGTGAGGCTGTCCCTGGTGTCCTTCAGAAAATTGATGCTGGTGCTGGCAGAGTGTGTGGCATCACTGAAGAGCGCAGAGTTGTGGTTTTCCGTGATGACAGTTGGGTTGATCTACAGGCATCTGGTGACCATGTCAGTGTAGGGCCTGCTGGGCTCTGGAATGTGGGTGTTGATGGCCTGGTCTCCAAGTGGTTTAGAAAAGGCTGGGTCCAGGTGAATCCAGGCAACCTGATCCAGATTGATGCTGGTGGGGACAAGTTTGTGGTGGGCTGCAATGCCTCCCACAGTATCTTCTGTCTGAACCACAGGCCTGCGCTGAGCTACGATGGCTCTGGCAGTGTGTCCTGGGTGGCAGTCCCAGGCGAGCTCAAGTACTACTCCTGTGGGCCTGTTGGGTGCTGGGGGGTGAACAAGCTAGATGAAATCCACGTCAAGCTGGGTGTCAGTGGGAATTCCTGTCATGGCCCTGAGAAGTGGTACCGCATTCCAGGCTCCCTGTCCATGGTGGAAGTGAGCACAGATGGCCAAGTGCATGGAGTGAACAAACATGGCTTGGTATTCAAAAGGATTGGTGTCAGTGCCTGTAACCCCTTTGGCAGTGGGTGGGAACATCTAAGGGTAGCTGGATTAAGCAAGCATGTGTCGTATGATCATGAAGTCCTCTGGATTATCTGCAGAAATGGTGAAGTCCAGAGGTGCAGGTTCTCTGAAGCCCTGTCTCCTGAGTAAATGTTGGCCACTTGTGTAGGCTGATGCTACTTTGAGGTGACATGGTATTGGGAGAAGTGCTTCTCTGGCTTCCAGATGCCTTGTGATCTGTATTCCATGTGTTAATAAAGCTCTAGGAAAATGGACTGACCATTGGTTTTGTTCCTCTGCTTTAACGTACTCTTGGCTCCTTGCTGATGCCATGAAGCCAAATCCACACCAATGGTCTTTTGTTCTAGAAATCCTTTTATTCAACTCCCAATTCCCTTGACTTCACTTCTTGACTGGTTTGTTGGAGTGCAGGGACAATTCCAGCTCTCTCAATGCAAGCACAGTCCTCTACTGTATCCATGTATGGTCAGAAAACCATATACTTGAGCTTCTTGTGAAATCGGGCTTTGTCACTCTTCAGCACAGCCTCACAAGTGTAAGGCATACTTTTGCTGAACAAGGAAGTCACCCTCTACTTCTACATTCTATAGTTCTGGATCCTAGACCATTGTCTAATGCTTGGCTACTGGTATATACTCCTAAGCATTCCTGGAGTAGAGACTGGATTTCAATGGTCTTAGGCTGAACCCTGGCTGTACTTGGTGTTGGACTCTCCACATGATAGCTCAATGTCTCAATACTTCGTGAAATTTAATTTCCTGCAGCTACCAGCAATCTGTTCTGTTCAAAGGCACGCTATATTGACCACTAATAACAAAGCAGGCTATTACAAAATTTAAATGATAATAGCACAATGCACAATACATCCAGTTCTTCCAGGTTCCTGCTCTGTAGCTTGCTTCTATATCCTGTGACCTGAGAATTGTGTAAAGTAGCCAACATCTGCAACAATGCTGGTGTTCCACAATTGTACTGACCACCATGTCCTGTGTTATGGTCAGATGAAGTCTAGCACTGCTGTTCAGTTTACTTGTTTCTGTTAGAATGCAGATCTAGCTTCTGCACAATACAGGcagacactgtacacacacaaactgcatttaaattagaaCTTGTATAATGAAATGTATGCTGATATTTTGTAACGTGTGTGAAATGAGTATATAGTGTGATATAGTAGACCTGTGATATTCCATATTAGTATGAATATTACTTCTGAAACAAAGATGATTCATTCTGCCACTGGTTTACCTGAAATCTTGTTCATTATATTTCCTAAAACTTGTTGCTGGACTGGAGGGTAAACAGCTCCTCTGGAATCATACACTATGTAGAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012530 True 2026 mRNA 0.46 4 20843804 20847235

Neighbor

gene id symbol gene type direction distance location
AMCG00012536 NA coding upstream 4338 20833871 ~ 20839466 (+)
AMCG00012532 NA coding upstream 14442 20819250 ~ 20829362 (+)
AMCG00012525 NA coding upstream 55685 20784619 ~ 20788119 (+)
AMCG00012519 NA coding upstream 458048 20372680 ~ 20385756 (+)
AMCG00012515 NA coding upstream 490525 20348607 ~ 20353279 (+)
AMCG00012534 NA coding downstream 58821 20906056 ~ 20916631 (+)
AMCG00012531 NA coding downstream 72472 20919707 ~ 20921908 (+)
AMCG00012535 lix1l,LOC106570188,LOC106588578 coding downstream 77231 20924466 ~ 20930384 (+)
AMCG00012529 lix1l,LOC106588578,LOC106570188 coding downstream 93745 20940980 ~ 20950454 (+)
AMCG00012533 rbm8a coding downstream 104613 20951848 ~ 20956923 (+)
G137539 NA non-coding upstream 86540 20757030 ~ 20757264 (+)
G137494 NA non-coding upstream 309845 20533752 ~ 20533959 (+)
G137364 NA non-coding upstream 514980 20321606 ~ 20328824 (+)
G137337 NA non-coding upstream 605931 20170426 ~ 20237873 (+)
G137634 NA non-coding downstream 372964 21220199 ~ 21221044 (+)
G137631 LOC107575789 non-coding downstream 384745 21231980 ~ 21267912 (+)
G137645 NA non-coding downstream 460983 21308218 ~ 21309033 (+)
G137669 NA non-coding downstream 754764 21601999 ~ 21602314 (+)
G137749 NA non-coding downstream 932831 21780066 ~ 21786045 (+)
AMCG00012523 NA other upstream 350017 20481114 ~ 20493787 (+)
AMCG00012521 NA other upstream 398517 20430925 ~ 20445287 (+)
AMCG00012522 atp8b2,LOC107677029,LOC107714674 other upstream 421248 20401009 ~ 20422556 (+)
AMCG00012516 NA other upstream 499158 20331081 ~ 20344646 (+)
AMCG00012512 NA other upstream 572885 20246651 ~ 20270919 (+)
AMCG00012539 otud7b,LOC106581836 other downstream 145255 20992490 ~ 21039749 (+)
G137583 NA other downstream 209460 21056695 ~ 21059263 (+)
G137633 NA other downstream 366362 21213597 ~ 21219163 (+)
G137636 NA other downstream 377506 21224741 ~ 21230836 (+)
AMCG00012546 NA other downstream 398428 21245663 ~ 21253003 (+)

Expression


Co-expression Network